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Table 2 Composition of the MetJ regulon for the five orders

From: The MetJ regulon in gammaproteobacteria determined by comparative genomics methods

  Ent Sym Pas Vib Aer Alt All
species 122 16 20 16 3 29 206
metJ *122 (122) 2 (0) 20 (15) 16 (16) 3 (3) 29 (28) 192 (184)
metR *122 (122) 2 (1) 19 (3) 16 (16) 3 (3) 26 (22) 188 (167)
metL 122 (117) -- -- 16 (16) 3 (2) 26 (24) 167 (159)
metA *122 (120) 3 (0) -- 16 (15) 3 (3) 27 (9) 171 (147)
metX/1/2 -- -- *19 (19) -- -- -- 19 (19)
metY 12 (0) -- 1 (0) 4 (0) 3 (2) *25 (18) 45 (20)
metB *122 (122) 3 (0) -- 16 (16) 3 (3) 25 (25) 169 (166)
metC *119 (81) 3 (0) 19 (0) 16 (0) -- 24 (8) 181 (89)
metF *122 (122) 13 (0) 18 (2) 16 (16) 2 (2) 23 (23) 194 (165)
metF2 -- -- -- -- -- 5 (4) 5 (4)
metH *112 (1) -- 9 (0) *16 (16) 3 (2) *28 (26) 168 (45)
metE *122 (122) 13 (1) 17 (14) 16 (16) 3 (3) 19 (18) 190 (174)
metK *122 (119) 14 (0) 20 (15) 16 (3) 3 (0) 29 (7) 204 (144)
ybdH/2 *101 (79) -- -- -- -- -- 101 (79)
mtrA *41 (19) -- -- -- -- -- 41 (19)
mtrC 41 (19) -- -- -- -- -- 41 (19)
mtrB/2 *40 (26) -- -- -- -- -- 40 (26)
mtrY/2 31 (9) -- -- -- -- -- 31 (9)
mtnK *38 (35) -- -- 1 (0) -- 1 (1) 40 (36)
mtnA *38 (35) -- -- -- -- 1 (1) 39 (36)
mtnD 35 (29) -- -- -- -- 1 (1) 36 (30)
mtnC 35 (35) -- -- -- -- 22 (1) 57 (36)
mtnB *35 (35) -- -- -- -- 2 (2) 37 (37)
mtnE *105 (99) -- -- -- -- 3 (1) 108 (100)
metNIQ *122 (121) 1 (1) 20 (16) 16 (16) 3 (3) 2 (2) 164 (159)
metT -- -- -- *11 (11) 2 (2) *26 (26) 39 (39)
btuB *116 (34) -- 3 (0) 16 (6) 3 (2) 27 (6) 165 (48)
mtsABC -- -- -- 10 (6) -- -- 10 (6)
nhaP -- -- 10 (0) *16 (16) 2 (2) 1 (0) 29 (18)
mmuPM *21 (21) -- -- -- -- -- 21 (21)
MHT1/dppABCD 9 (9) -- -- -- -- -- 9 (9)
MHT2/arcD -- -- 5 (0) 1 (1) 2 (2) 6 (6) 14 (9)
metE2a *28 (28) -- -- -- -- -- 28 (28)
mtcBC 20 (4) -- -- -- -- 2 (0) 22 (4)
pcbC/megL -- -- -- -- 2 (0) 5 (5) 7 (5)
  1. The number of species within an order that have each gene are indicated and the number of those genes that have metboxes is in parentheses. Symbiotic Enterobacteria have been counted separately. Genes from an order that were tested experimentally for repression are marked with an asterisk.