Table 1 Summary of the sequencing and assembly

Sequencing

  Raw reads

503,789

199,554,589

  Average read length

396 bp

  High-quality reads

445,787

175,500,089

  Reads used in assembly

421,845

165,785,088

  Average read length after trimming

393 bp

Contigs

  Reads assembled as contigs

382,884

150,473,414

  Number of contigs

13,426

13,438,442

  Average length of contigs

1,000 bp

  Range of contig length

50-9,881 bp

  Depth on contigs

14.48

Isotigs

  Number of isotigs

10,784

16,340,803

  Average length of isotigs

1,515 bp

  Range of isotig length

50-13,194

  Depth on isotigs

1.24