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Table 1 Characteristics of the reads from the healthy and the wounded A . sinensis

From: Identification of genes related to agarwood formation: transcriptome analysis of healthy and wounded tissues of Aquilaria sinensis

Numbers

Healthy

Wounded

Total reads

562,060

565,008

Vector readsa

2,698

2,095

Low quality readsb

28,924

19,882

High quality readsc

530,438

543,031

Contigsd

66,207

71,657

Singletse

1,765

2,482

Unigenesf

67,972

74,139

  1. a Vector reads: The reads sequences are all vector sequences.
  2. b Low quality reads: After removing empty reads and vector reads, the length of reads is less than the cutoff length (100 bp).
  3. c High quality reads: After removing empty reads and vector reads, the length of reads is more than the cutoff length (100 bp).
  4. d Contigs: reads number ≥ 2.
  5. e Singlets: reads = 1.
  6. f Unigenes = Contigs + Singlets.