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Figure 10 | BMC Genomics

Figure 10

From: Confero: an integrated contrast data and gene set platform for computational analysis and biological interpretation of omics data

Figure 10

Screenshot of ORA output in Galaxy. ORA has been performed with the “BMC_Bioconductor_Estrogen_PW_[Estro10]” contrast using the complete MSigDB C5 gene set collection. The users can visualize the ORA output in Galaxy (middle frame) and easily export the results as a tab-delimited txt file. The file contains 4 columns corresponding to gene set names, number of overlapping genes between the DEG list and gene set, the hypergeometric test p-value and the adjusted p-value (FDR).

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BMC Genomics

ISSN: 1471-2164

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