Table 3 Comparison of phenylpropanoid biosynthetic genes of L. chinense with the most orthologous genes
Genes of L. chinense | Length (amino acid) | Orthologous genes (Accession no.) | Identity (%) |
|---|---|---|---|
LcPAL | 719 | Petunia axillaris PAL1 (JF793918) | 85 |
Platycodon grandiflorus PAL2 (JN392749) | 78 | ||
Coffea arabica PAL1 (JQ946534) | 76 | ||
LcC4H | 506 | Capsicum annuum C4H (AF212318) | 90 |
Petunia hybrida C4H2 (HM447145) | 90 | ||
Lithospermum erythrorhizon C4H2 (AB055508) | 82 | ||
Lc4CL | 566 | Nicotiana tabacum 4CL1 (U50845) | 89 |
Petunia hybrida 4CL (JN120849) | 87 | ||
Solanum lycopersicum 4CL1 (XM_004235822) | 87 | ||
LcCHS | 377 | Solanum lycopersicum CHS (XM_004239850) | 84 |
Petunia hybrida CHS (X14592) | 85 | ||
Senna alata CHS (AF358432) | 73 | ||
LcCHI | 184 | Nicotiana tabacum CHI1 (AB213651) | 89 |
Capsicum annuum CHI (FJ705843) | 89 | ||
Solanum lycopersicum CHI (XM_004238946) | 91 | ||
LcF3H | 218 | Solanum tuberosum F3H (AY102035) | 87 |
Nicotiana tabacum F3H (AB289450) | 91 | ||
Capsicum annuum F3H (FJ705844) | 89 | ||
LcFLS | 246 | Solanum tuberosum FLS (FJ770475) | 91 |
Nicotiana tabacum FLS1 (DQ435530) | 91 | ||
Solanum lycopersicum FLS (XM_004250281) | 89 | ||
LcF3’H | 71 | Solanum lycopersicum F3’H(XM_004235959) | 87 |
Petunia hybrida F3’H (AF155332) | 88 | ||
Antirrhinum majus F3’H (DQ272592) | 78 | ||
Lc3GT | 122 | Nicotiana tabacum 3GT (AB723686) | 88 |
Petunia hybrida 3GT (AB027454) | 85 | ||
Capsicum annuum 3GT (JN808443) | 91 | ||
LcC3H | 523 | Coffea arabica C3H25 (JQ946542) | 77 |
Populus trichocarpa C3H3 (EU603301) | 73 | ||
Trifolium pratense C3H (GQ919201) | 73 | ||
LcCOMT | 378 | Capsicum annuum COMT (AF212316) | 84 |
Capsicum chinense COMT (AF081214) | 87 | ||
Catharanthus roseus COMT1 (AY028439) | 79 |