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Table 1 Gene clusters assigned to TFs and regulated genes

From: Growth rate-coordinated transcriptome reorganization in bacteria

TF name

Regulated cluster

TF cluster

rpoN

C1

C2

narP

C1

C1

narL

C1

C3

fhlA

C1

C1

rpoS

C2

C2

gadW

C2

C2

rcsB

C2

C3

gadX

C2

C2

rpoD

C3

C1

fis

C3

C3

purR

C3

C3

lrp

C3

C3

  1. TF name, Regulated cluster, and TF cluster represent the names of the regulators for the transcriptional networks (TFs), the clusters (defined in Figure 3) of the genes under the control of the corresponding regulators, and the clusters of the assigned regulators.