Genomic and transcriptomic differences in community acquired methicillin resistant Staphylococcus aureus USA300 and USA400 strains

Table 1 USA300 and USA 400 isolates

USA Pulsotype	Strain name	ST	coverage	Year	Site of isolation or syndrome	Onset	SRA ID
USA400	staph649	ST1	99.02	2004	Skin infection	CA	SRX026443
USA400	gsast11506	ST1	99	2000		CA	SRX026318
USA400	gsast2674	ST1	99	2000	Respiratory, severe sepsis nec pneumonia	CA	SRX025928
USA400	gsastq2352	ST1	99	2000	Respiratory, severe sepsis nec pneumonia	CA	SRX025931
USA300	gsast10243	ST8	98.15	2007	Blood	CA	SRX026310
USA300	gsast10329	ST8	99.27	2007	Peritoneal/body fluid	HA	SRX026315
USA300	gsast1135	ST8	98.15	2004	Skin infection	CA	SRX026317
USA300	gsast11578	ST8	99.3	2002		CA	SRX025942
USA300	gsast1185	ST8	96.65	2004	Skin infection	CA	SRX025925
USA300	gsast13205	ST8	97.37	2008	Blood, nec pneumonia, sepsis		SRX025943
USA300	gsast2145	ST8	99.28	2005	Skin infection	CA	SRX026311
USA300	gsast5319	ST8	99.32	2005	Skin infection	CA	SRX026314
USA300	gsast9376	ST8	97.91	2007	Respiratory	HA	SRX025927
USA300	gsast9549	ST8	99.26	2007	Screen	HA	SRX025926
USA300	gsast9636	ST8	99.28	2007	Respiratory	HA	SRX025944
USA300	gsast9750	ST8	98.82	2007	Screen	HA	SRX025939
USA300	gsastca11	ST8	95.94	1998		CA	SRX025929
USA300	staph923	ST8	99.31	2004	Skin infection	CA	SRX025930

ISSN: 1471-2164