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Table 12 Overlap study of ChIP-seq peaks.

From: Evaluation of experimental design and computational parameter choices affecting analyses of ChIP-seq and RNA-seq data in undomesticated poplar trees

File IgG_r1 IgG_r2 RNA pol II_r1 RNA pol II_r2 ARK1_3738_r1 ARK1_3738_r2 ARK1_3940_r1 ARK1_3940_r2
IgG_r1 197        
IgG_r2 12 493       
Pt_RNA pol II_r1 9 2 13350      
Pt_RNA pol II_r2 16 69 6944 8688     
ARK1_3738_r1 118 39 3210 1610 12155    
ARK1_3738_r2 104 87 4610 2512 11075 15683   
ARK1_3940_r1 152 122 127 168 741 871 2049  
ARK1_3940_r2 157 344 1111 896 3253 3611 1361 9076
  1. Numbers indicate the overlapping peaks between two ChIP-seq datasets.