Table 3 G4 density of each gene computed from the results of the HMM-based model 2.
From: Using hidden Markov models to investigate G-quadruplex motifs in genomic sequences
Gene symbol | Z(D pred ) | Z(D ref ) | Gene symbol | Z(D pred ) | Z(D ref ) |
|---|---|---|---|---|---|
HTF9C | 2.914 | 2.753 | FPRL1 | -0.275 | -0.138 |
TRAF7 | 2.601 | 2.540 | MGC4707 | -0.407 | -0.417 |
NGFRAP1 | 2.298 | 2.107 | KIAA2010 | -0.438 | -0.515 |
IMPDH1 | 1.453 | 1.708 | TJP2 | -0.444 | -0.447 |
ITM2C | 1.395 | 1.578 | EGFR | -0.452 | -0.379 |
ZAP70 | 1.365 | 1.247 | IFRD1 | -0.517 | -0.538 |
ERCC1 | 1.347 | 1.180 | RGS6 | -0.537 | -0.484 |
DKFZp761I2123 | 0.944 | 0.987 | RAP1B | -0.677 | -0.747 |
ARS2 | 0.896 | 1.009 | BPGM | -0.681 | -0.585 |
MGC3207 | 0.848 | 0.884 | C14orf138 | -0.695 | -0.694 |
SP8 | 0.733 | 0.513 | DNAJA5 | -0.743 | -0.756 |
AHNAK | 0.700 | 0.659 | SUNC1 | -0.753 | -0.753 |
FUS | 0.689 | 0.767 | NT5C3 | -0.771 | -0.798 |
SEMA5B | 0.470 | 0.610 | SYNJ1 | -0.775 | -0.759 |
LOC285989 | 0.457 | 0.359 | ZCCHC11 | -0.806 | -0.819 |
RAB37 | 0.364 | 0.410 | KRIT1 | -0.845 | -0.879 |
UPP1 | 0.154 | 0.208 | CNOT4 | -0.915 | -0.929 |
SF1 | 0.143 | 0.242 | FMO3 | -0.917 | -0.917 |
PLEKHH1 | 0.142 | 0.154 | PPP1R9A | -0.991 | -0.984 |
ZNF32 | 0.066 | 0.062 | FLJ20097 | -1.012 | -1.015 |
SLC37A3 | -0.025 | -0.041 | PHF14 | -1.017 | -1.054 |
CCM2 | -0.028 | 0.031 | GMFB | -1.076 | -1.077 |
FOXM1 | -0.044 | -0.129 | TFEC | -1.113 | -1.123 |
DIP2A | -0.162 | -0.173 | COMMD6 | -1.194 | -1.123 |
MAWBP | -0.221 | -0.253 | USP42 | -1.448 | -1.484 |