Table 4 G4 density of each gene computed from the results of the HMM-based model 4.
From: Using hidden Markov models to investigate G-quadruplex motifs in genomic sequences
Gene symbol | Z(D pred ) | Z(D ref ) | Gene symbol | Z(D pred ) | Z(D ref ) |
|---|---|---|---|---|---|
HTF9C | 2.732 | 2.753 | MAWBP | -0.272 | -0.253 |
TRAF7 | 2.613 | 2.540 | EGFR | -0.393 | -0.379 |
NGFRAP1 | 2.199 | 2.107 | MGC4707 | -0.420 | -0.417 |
IMPDH1 | 1.712 | 1.708 | TJP2 | -0.452 | -0.447 |
ITM2C | 1.608 | 1.578 | RGS6 | -0.501 | -0.484 |
ZAP70 | 1.237 | 1.247 | KIAA2010 | -0.505 | -0.515 |
ERCC1 | 1.224 | 1.180 | IFRD1 | -0.548 | -0.538 |
ARS2 | 0.995 | 1.009 | BPGM | -0.616 | -0.585 |
DKFZp761I2123 | 0.967 | 0.987 | C14orf138 | -0.675 | -0.694 |
MGC3207 | 0.801 | 0.884 | RAP1B | -0.744 | -0.747 |
FUS | 0.734 | 0.767 | SUNC1 | -0.752 | -0.753 |
AHNAK | 0.679 | 0.659 | DNAJA5 | -0.763 | -0.756 |
SEMA5B | 0.593 | 0.610 | SYNJ1 | -0.770 | -0.759 |
SP8 | 0.563 | 0.513 | NT5C3 | -0.811 | -0.798 |
RAB37 | 0.417 | 0.410 | ZCCHC11 | -0.817 | -0.819 |
LOC285989 | 0.382 | 0.359 | KRIT1 | -0.888 | -0.879 |
SF1 | 0.286 | 0.242 | CNOT4 | -0.930 | -0.929 |
UPP1 | 0.180 | 0.208 | FMO3 | -0.930 | -0.917 |
PLEKHH1 | 0.157 | 0.154 | PPP1R9A | -1.001 | -0.984 |
ZNF32 | 0.101 | 0.062 | FLJ20097 | -1.021 | -1.015 |
CCM2 | 0.023 | 0.031 | PHF14 | -1.063 | -1.054 |
SLC37A3 | -0.032 | -0.041 | GMFB | -1.068 | -1.077 |
FOXM1 | -0.114 | -0.129 | TFEC | -1.130 | -1.123 |
FPRL1 | -0.142 | -0.138 | COMMD6 | -1.174 | -1.123 |
DIP2A | -0.188 | -0.173 | USP42 | -1.486 | -1.484 |