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Table 1 Summary of the human MBD polypeptides

From: Comparative study of methyl-CpG-binding domain proteins

Accession No. a) Name Search method / databases b) Domains c) MBD position d)
P51608 MECP2 a, b, c, d, e, f, g, ac, bc, cc   96–149
Q9UIS9 MBD1 a, b, c, d, e, f, g, ac, bc, cc zf-CXXC 7–59
Q9UBB5 MBD2 a, b, c, d, e, f, g, ac, bc, cc   151–204
O95983 MBD3 a, b, c, d, e, f, g, ac, bc, cc   8–60
Q9Z2D7 MBD4 a, b, c, d, e, f, g, ac, bc, cc HhH-GPD 82–135
Q9UIF9 BAZ2A/TIP5 e, f, g AT_hook, DDT, PHD, bromodomain 526–577
Q9UIF8 BAZ2B e, f, g DDT, PHD, bromodomain, 549–600
Q96T68 CLLD8 e, f, g SET 162–216
Q15047 SETDB1 e, f, g SET 597–653
Q9P267 KIAA1461 e, f PWWP 21–79
Q96Q00 KIAA1887 e, f   304–456
  1. a) Accession numbers according to the SwissProt database. b) a = BLASTP, b = TBLASTN, c = TBLASTX, d = PSI-BLAST, e = Pfam, f = Ncbi, g = SSDB, ac = BLASTP in Celera database, bc = TBLASTN in Celera database, cc = TBLASTX in Celera database. c) domain nomenclature according to the Pfam database, all sequences contain an MBD in addition. d) position in amino acid sequence