Skip to main content

Table 3 Quantitative RT-PCR primers and probes

From: Selection and validation of endogenous reference genes using a high throughput approach

AFAP

(+)-TGTCAAGTTAAACCACTAATGTGTTGGT

Y= -3.105x + 43.726 R2 = 0.99

 

(-)-GGCATCCAAATTCTCCAAGAAA

 
 

FAM-TGCTGCCTCTCCTGAGTAGGGTGGGT-TAMRA

 

CDK5R1

(+)-TCCTACATGGGCAACGAGATC

Y = -3.315x + 45.983 R2 = 0.99

 

(-)-CCAAAAGGCCTCCTTGCA

 
 

FAM -TACCCGCTCAAGCCCTTCCTGGTG -TAMRA

 

COL8A1

(+)-CCGAGCTAACCGCACCTTT

Y = -3.143 x +43.294 R2 = 0.99

 

(-)-GTCTGCGGGTTGTAGTTCTGTCT

 
 

FAM -AGTGAAGTTTAACAAACTGCTGTATAACGG -TAMRA

 

FZD

(+)-AGCCTCAAAGGTTCCACATCTC

Y = -3.515 x + 47.092 R2 = 0.99

 

(-)-AGGTCACTTCCAGTGTAACACAAATT

 
 

FAM -TGAGAAAAGAGCAGGGAGGTGGTTGTCA -TAMRA

 

GPLD1-1

(+)-CAGATTGAAGATTTCACTGCATTTC

Y = -3.653 x + 49.086 R2 = 0.99

 

(-)-CATCAAAATGCTCACCATGGA

 
 

FAM -TCTGCCCACCTCTCTCATGCTGAATCAC -TAMRA

 

GPLD1-2

(+)-CTTTTGCCTGTAGTAGTAAATTGCTTTTA

Y = -3.168x + 46.599 R2 = 0.99

 

(-)-AACTGGCCATATAAC CAAAGGTGTT

 
 

FAM -TGAATGGTGTTTATTAAACCCTTATGGTCGATATTTCC-TAMRA

 

HIRIP5

(+)-GCTGCCCTAGTTCAATCATTACTCT

Y = -3.160x + 43.313 R2 = 0.99

 

(-)-CGCCTTCTACCTCCGGAATAT

 
 

FAM – AAAAATGGAATTCAGAACATGCTGCA-TAMRA

 

HIST1HIA

(+)-AGGCGTCCTCCGTGGAA

Y = -3.143x + 43.294 R2 = 0.99

 

(-)-ATGCACCCGTTGCCTTAGTT

 
 

FAM – AGCCCGGCGCCTCAAAGGTG-TAMRA

 

NEDD8

(+)-TGACCGGAAAGGAGATTGAGA

Y = -3.458x + 48.686 R2 = 0.99

 

(-)-CCACACGCTCCTTGATTCG

 
 

FAM – TGACATTGAACCTACAGACAAGGTGGA-TAMRA

 

PTH

(+)-GCATAACCTGGGAAAACATCTGA

Y = -3.063x + 45.215 R2 = 0.99

 

(-)-TGCACATCCTGCAGCTTCTT

 
 

FAM -TCGATGGAGAGAGTAGAATGGCTGC-TAMRA

 

RAB31

(+)-CCCCTGAAGGATGCTAAGGAA

Y = -3.303x + 48.517 R2 = 0.99

 

(-)-AGCATTTTTTGCACTTGTCTCAAC

 
 

FAM – ACGCTGAATCCATAGGTGCCATC-TAMRA

 

SNRPD3

(+)-GGCACAGCTGGAGCAGGTAT

Y = -3.177x + 47.200 R2 = 0.99

 

(-)-CTTCAGCATGTCAGGCAAAATC

 
 

FAM – ATCCGTGGCAGCAAAATCCGC -TAMRA

 

β-actin

(+)-GGCACCCAGCACAATGAAG

Y = -3.127x + 44.733 R2 = 0.99

 

(-)-GCCGATCCACACGGAGTACT

 
 

FAM-TCAAGATCATTGCTCCTCCTGAGCGC-TAMRA

 

gp100

(+)GGTTCCTTTTCCGTCACCCT

Y = -3.282x + 45.987 R2 = 0.99

 

(-)CTCACCGGACGGCACAG

 
 

FAM-ACATTGTCCAGGGTATTGAAAGTGCCGAGAT-TAMRA

Â