Table 1 Placement of Ginkgo unigenes into functional categories (funcats). Ginkgo genes with a BLASTP expect value (E-value) of > e-10 were assigned into funcats based on their similarity score. The analysis was performed at the Centre for Biotechnology, Turku, Finland. Previous funcat analysis data from Cycas rumphii is shown.
Functional Category | Ginkgo% | Cycad% |
|---|---|---|
Metabolism | 11.0 | 10.3 |
Energy | 5.0 | 5.1 |
Cell Growth, Cell Division and DNA Synthesis | 5.4 | 9.2 |
Transcription | 3.6 | 5.0 |
Protein Synthesis | 8.4 | 5.8 |
Protein Destination | 5.8 | 8.3 |
Transport Facilitation | 2.0 | 1.3 |
Intracellular Transport | 3.4 | 4.3 |
Cellular Biogenesis | 3.5 | 3.3 |
Cellular Communication/Signal Transduction | 3.5 | 4.2 |
Cell Rescue, Defense, Cell Death and Ageing | 7.2 | 6.8 |
Ionic Homeostasis | 0.5 | 0.1 |
Cellular Organization | 18.8 | 21.6 |
Classification Not Yet Clear-Cut | 7.3 | 4.6 |
Unclassified Proteins | 14.1 | 10.3 |