Spano F, Crisanti A: Cryptosporidium parvum: the many secrets of a small genome. Int J Parasitol. 2000, 30 (4): 553-565. 10.1016/S0020-7519(99)00188-5.
Article
CAS
PubMed
Google Scholar
Abrahamsen M, Schroeder AA: Analysis of intracellular Cryptosporidium parvum gene expression. Mol Biochem Parasitol. 1999
Google Scholar
Girouard D, Gallant J, Akiyoshi DE, Nunnari J, Tzipori S: Failure to propagate Cryptosporidium spp. in cell-free culture. J Parasitol. 2006, 92 (2): 399-400. 10.1645/GE-661R.1.
Article
PubMed
Google Scholar
Abrahamsen MS, Templeton TJ, Enomoto S, Abrahante JE, Zhu G, Lancto CA, Deng M, Liu C, Widmer G, Tzipori S, Buck GA, Xu P, Bankier AT, Dear PH, Konfortov BA, Spriggs HF, Iyer L, Anantharaman V, Aravind L, Kapur V: Complete Genome Sequence of the Apicomplexan, Cryptosporidium parvum. Science. 2004, 304: 441-445. 10.1126/science.1094786.
Article
CAS
PubMed
Google Scholar
Xu P, Widmer G, Wang Y, Ozaki LS, Alves JM, Serrano MG, Puiu D, Manque P, Akiyoshi D, Mackey AJ, Pearson WR, Dear PH, Bankier AT, Peterson DL, Abrahamsen MS, Kapur V, Tzipori S, Buck GA: The genome of Cryptosporidium hominis. Nature. 2004, 431 (7012): 1107-1112. 10.1038/nature02977.
Article
CAS
PubMed
Google Scholar
Mercier C, Lefebvre-Van Hende S, Garber GE, Lecordier L, Capron A, Cesbron-Delauw MF: Common cis-acting elements critical for the expression of several genes of Toxoplasma gondii. Mol Microbiol. 1996, 21 (2): 421-428. 10.1046/j.1365-2958.1996.6501361.x.
Article
CAS
PubMed
Google Scholar
NF VANP, Welagen J, Vermeulen AN, Schaap D: The complete set of Toxoplasma gondii ribosomal protein genes contains two conserved promoter elements. Parasitology. 2006, 133 (Pt 1): 19-31.
Google Scholar
Kibe MK, Coppin A, Dendouga N, Oria G, Meurice E, Mortuaire M, Madec E, Tomavo S: Transcriptional regulation of two stage-specifically expressed genes in the protozoan parasite Toxoplasma gondii. Nucleic Acids Res. 2005, 33 (5): 1722-1736. 10.1093/nar/gki314.
Article
CAS
PubMed Central
PubMed
Google Scholar
Bailey TL, Elkan C: Fitting a mixture model by expectation maximization to discover motifs in biopolymers. Proc Int Conf Intell Syst Mol Biol. 1994, 2: 28-36.
CAS
PubMed
Google Scholar
Hughes JD, Estep PW, Tavazoie S, Church GM: Computational identification of cis-regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae. J Mol Biol. 2000, 296 (5): 1205-1214. 10.1006/jmbi.2000.3519.
Article
CAS
PubMed
Google Scholar
Templeton TJ, Lancto CA, Vigdorovich V, Liu C, London NR, Hadsall KZ, Abrahamsen MS: The Cryptosporidium oocyst wall protein is a member of a multigene family and has a homolog in Toxoplasma. Infect Immun. 2004, 72 (2): 980-987. 10.1128/IAI.72.2.980-987.2004.
Article
CAS
PubMed Central
PubMed
Google Scholar
Striepen B, Pruijssers AJP, Huang J, Li C, Gubbels MJ, Umejiego NN, Hedstrom L, Kissinger JC: Gene transfer in the evolution of parasite nucleotide biosynthesis. Proc Natl Acad Sci U S A. 2004, 101 (9): 3154-3159. 10.1073/pnas.0304686101.
Article
CAS
PubMed Central
PubMed
Google Scholar
Bell SP, Dutta A: DNA replication in eukaryotic cells. Annu Rev Biochem. 2002, 71: 333-374. 10.1146/annurev.biochem.71.110601.135425.
Article
CAS
PubMed
Google Scholar
Spellman PT, Sherlock G, Zhang MQ, Iyer VR, Anders K, Eisen MB, Brown PO, Botstein D, Futcher B: Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization. Mol Biol Cell. 1998, 9 (12): 3273-3297.
Article
CAS
PubMed Central
PubMed
Google Scholar
Keithly JS, Langreth SG, Buttle KF, Mannella CA: Electron tomographic and ultrastructural analysis of the Cryptosporidium parvum relict mitochondrion, its associated membranes, and organelles. J Eukaryot Microbiol. 2005, 52 (2): 132-140. 10.1111/j.1550-7408.2005.04-3317.x.
Article
PubMed
Google Scholar
Entrala E, Mascaro C: Glycolytic enzyme activities in Cryptosporidium parvum oocysts. FEMS Microbiol Lett. 1997, 151 (1): 51-57. 10.1111/j.1574-6968.1997.tb10393.x.
Article
CAS
PubMed
Google Scholar
Struhl K: Fundamentally different logic of gene regulation in eukaryotes and prokaryotes. Cell. 1999, 98 (1): 1-4. 10.1016/S0092-8674(00)80599-1.
Article
CAS
PubMed
Google Scholar
Day DA, Tuite MF: Post-transcriptional gene regulatory mechanisms in eukaryotes: an overview. J Endocrinol. 1998, 157 (3): 361-371. 10.1677/joe.0.1570361.
Article
CAS
PubMed
Google Scholar
Kozak M: Regulation of translation via mRNA structure in prokaryotes and eukaryotes. Gene. 2005, 361: 13-37. 10.1016/j.gene.2005.06.037.
Article
CAS
PubMed
Google Scholar
Bozdech Z, Zhu J, Joachimiak MP, Cohen FE, Pulliam B, DeRisi JL: Expression profiling of the schizont and trophozoite stages of Plasmodium falciparum with a long-oligonucleotide microarray. Genome Biol. 2003, 4 (2): R9-10.1186/gb-2003-4-2-r9.
Article
PubMed Central
PubMed
Google Scholar
Le Roch KG, Johnson JR, Florens L, Zhou Y, Santrosyan A, Grainger M, Yan SF, Williamson KC, Holder AA, Carucci DJ, Yates JR, Winzeler EA: Global analysis of transcript and protein levels across the Plasmodium falciparum life cycle. Genome Res. 2004, 14 (11): 2308-2318. 10.1101/gr.2523904.
Article
CAS
PubMed Central
PubMed
Google Scholar
Radke JR, Behnke MS, Mackey AJ, Radke JB, Roos DS, White MW: The transcriptome of Toxoplasma gondii. BMC Biol. 2005, 3: 26-10.1186/1741-7007-3-26.
Article
PubMed Central
PubMed
Google Scholar
Sullivan WJ, Hakimi MA: Histone mediated gene activation in Toxoplasma gondii. Mol Biochem Parasitol. 2006
Google Scholar
Stamatoyannopoulos JA: The genomics of gene expression. Genomics. 2004, 84 (3): 449-457. 10.1016/j.ygeno.2004.05.002.
Article
CAS
PubMed
Google Scholar
Deng M, Templeton TJ, London NR, Bauer C, Schroeder AA, Abrahamsen MS: Cryptosporidium parvum genes containing thrombospondin type 1 domains. Infect Immun. 2002, 70 (12): 6987-6995. 10.1128/IAI.70.12.6987-6995.2002.
Article
CAS
PubMed Central
PubMed
Google Scholar
Coulson RM, Hall N, Ouzounis CA: Comparative genomics of transcriptional control in the human malaria parasite Plasmodium falciparum. Genome Res. 2004, 14 (8): 1548-1554. 10.1101/gr.2218604.
Article
CAS
PubMed Central
PubMed
Google Scholar
Callebaut I, Prat K, Meurice E, Mornon JP, Tomavo S: Prediction of the general transcription factors associated with RNA polymerase II in Plasmodium falciparum: conserved features and differences relative to other eukaryotes. BMC Genomics. 2005, 6: 100-10.1186/1471-2164-6-100.
Article
PubMed Central
PubMed
Google Scholar
Meissner M, Soldati D: The transcription machinery and the molecular toolbox to control gene expression in Toxoplasma gondii and other protozoan parasites. Microbes Infect. 2005, 7 (13): 1376-1384. 10.1016/j.micinf.2005.04.019.
Article
CAS
PubMed
Google Scholar
Balaji S, Babu MM, Iyer LM, Aravind L: Discovery of the principal specific transcription factors of Apicomplexa and their implication for the evolution of the AP2-integrase DNA binding domains. Nucleic Acids Res. 2005, 33 (13): 3994-4006. 10.1093/nar/gki709.
Article
CAS
PubMed Central
PubMed
Google Scholar
Salzberg SL, Pertea M, Delcher AL, Gardner MJ, Tettelin H: Interpolated Markov models for eukaryotic gene finding. Genomics. 1999, 59 (1): 24-31. 10.1006/geno.1999.5854.
Article
CAS
PubMed
Google Scholar
Crooks GE, Hon G, Chandonia JM, Brenner SE: WebLogo: a sequence logo generator. Genome Res. 2004, 14 (6): 1188-1190. 10.1101/gr.849004.
Article
CAS
PubMed Central
PubMed
Google Scholar