Table 2 Top 10 functional enrichment pathways in Yorkshire pigs
Path-ID | Path name | DEGs | FDR | Enrichment |
|---|---|---|---|---|
ko05012 | Parkinson’s disease | 59 | 1.96E-09 | 3.0 |
ko04260 | Cardiac muscle contraction | 33 | 4.32E-06 | 3.4 |
ko00190 | Oxidative phosphorylation | 47 | 4.13E-05 | 2.5 |
ko05016 | Huntington’s disease | 55 | 3.06E-03 | 1.9 |
ko03008 | Ribosome biogenesis in eukaryotes | 28 | 6.55E-03 | 2.5 |
ko01100 | Metabolic pathways | 206 | 7.54E-03 | 1.3 |
ko05010 | Alzheimer’s disease | 50 | 1.98E-02 | 1.8 |
ko00010 | Glycolysis/Gluconeogenesis | 22 | 3.10E-02 | 2.6 |
ko00020 | Citrate cycle (TCA cycle) | 13 | 4.25E-02 | 3.7 |
ko03050 | Proteasome | 15 | 5.52E-02 | 3.2 |