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Table 5 Pseudogenes in 41 mitochondrial genomes sequenced

From: Rapid evolutionary divergence of Gossypium barbadense and G. hirsutum mitochondrial genomes

No.

Species

Pseudogenes

1

Marchantia polymorpha

nad7

2

Pleurozia purpurea

nad7

3

Treubia lacunosa

ccmB, ccmFC

4

Megaceros aenigmaticus

rps1, rps4, rps7, rps8, rps11, rps12, rpl5, rpl6, atp8, ccmFC, sdh3

5

Phaeoceros laevis

rps1, rps2, rps4, rps7, rps11, rps12, rpl16, atp8, ccmFC, sdh3

6

Buxbaumia aphylla

nad7 a

7

Anomodon rugelii

rps8, rps10

8

Aegilops speltoides

rpl2, rpl16(2), rps19

9

Brassica napus

cox2-2

10

Ajuga reptans

rps4 a

11

Asclepias syriaca

rps7, rps13, rpl16, atp6

12

Beta macrocarpa

rps3, rps7, petG(cp),sdh4

13

Beta vulgaris subsp. maritima

rps3, rps7, petG(cp),sdh4

14

Boea hygrometrica

rpl16

15

Citrullus lanatus

rps14

16

Cucumis sativus

rps19, rpl2

17

Cucurbita pepo

rps14, rpl2

18

Cycas taitungensis

rps12

19

Daucus carota subsp. sativus

atp1, atp9(2)

20

Gossypium barbadense

rps3

21

Gossypium hirsutum

rps3

22

Huperzia squarrosa

rps8, ccmFC-1, ccmFC-2

23

Lotus japonicus

rps7, rps19, rpl10, cob, nad6, sdh3, sdh4, atp6

24

Malus x domestica

rps3, rps4, rps19, sdh3

25

Millettia pinnata

rps7, rps19, rpl2(2), sdh4, nad6

26

Mimulus guttatus

rpl2

27

Oryza sativa subsp. japonica

rps11, rps14(2)

28

Oryza sativa subsp.indica

rps11, rps14, rpl16

29

Rhazya stricta

sdh3

30

Ricinus communis

rps19 a, atp6 a

31

Salvia miltiorrhiza

ndhB(cp), sdh4

32

Silene conica

rps3 a, ccmFc

33

Silene latifolia

rps3 a, rps4, rps13, rps14 a, sdh3, sdh4

34

Silene noctiflora

rps3 a, rps12, mttB-2

35

Spirodela polyrhiza

rps14, rps19

36

Triticum aestivum

rpl2

37

Triticum timopheevii

rps19, rpl12, rpl16, atp8, cox2-1, ccmC

38

Vaccinium macrocarpon

rps14 a, nad4L a

39

Vigna radiata

sdh4

40

Vitis vinifera

rps3(2), rpl2, nad1, nad4, nad6, atp1, atp9, ccmFC, sdh3

41

Zea mays subsp. mays

rps12,rps19, rpl2, rpl23, rbcL(cp), ndhB(cp)

  1. apossible pseudogenes, (2) two copies of pseudogenes, cp pseudogenes of chloroplast origin and Gossypium species are given in bold