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Table 5 Differential expression analysis for 454 data: top 30 transcripts expressed in glowworm light organ tissue but not in non-light organ tissue

From: Comparative RNA seq analysis of the New Zealand glowworm Arachnocampa luminosa reveals bioluminescence-related genes

Contig number Gene length (bp) Total gene reads Normalized expression values RPKM Putative identity from BLASTX search hits
13443 427 347 1444.3 1740.2 No significant similarity found
10414 304 64 374.2 450.8 luciferin 4-monooxygenase
2392 1330 156 208.5 251.2 heat shock protein 70
13448 565 65 204.5 246.4 sugar transporter sweet1-like isoform 2
13375 816 82 178.6 215.2 No significant similarity found
14967 142 10 125.2 150.8 No significant similarity found
94 215 15 124 149.4 No significant similarity found
860 68 4 104.5 126.0 No significant similarity found
4416 1031 54 93.1 112.2 No significant similarity found
10178 78 4 91.1 109.8 No significant similarity found
10298 119 6 89.6 108.0 hypothetical protein Sulku_2095
14957 504 25 88.2 106.2 No significant similarity found
161 142 7 87.6 105.6 No significant similarity found
17729 168 8 84.6 102.0 No significant similarity found
706 85 4 83.6 100.8 No significant similarity found
10061 152 7 81.8 98.6 troponin i
14955 181 8 78.6 94.6 No significant similarity found
2879 1600 70 77.8 93.7 protein maelstrom homolog
80 70 3 76.2 91.8 No significant similarity found
14930 118 5 75.3 90.7 No significant similarity found
15799 49 2 72.5 87.4 No significant similarity found
10252 74 3 72.1 86.8 No significant similarity found
7300 228 9 70.2 84.5 No significant similarity found
10131 104 4 68.4 82.4 No significant similarity found
1453 55 2 64.6 77.9 No significant similarity found
15071 83 3 64.2 77.4 No significant similarity found
14973 194 7 64.1 77.3 No significant similarity found
9 201 7 61.9 74.6 No significant similarity found
15207 173 6 61.6 74.3 No significant similarity found
788 117 4 60.8 73.2 No significant similarity found
  1. Transcripts areranked according to normalized expression values; read counts were scaled so that the median values were made equal. RPKM = reads per kilobase of exon model per million mapped reads