Table 2 Summary of differentially expressed sRNAs during high cell density fermentation
From: Differential expression of small RNAs under chemical stress and fed-batch fermentation in E. coli
Growth phases compared | Number of differentially expressed sRNAs | Known upregulated sRNAs | Known downregulated sRNAs | ||
|---|---|---|---|---|---|
Total | Up | Down | |||
Fed-batch exponential vs. Batch exponential | 9 | 5 | 4 | SroC | SroA |
Transition vs. Batch exponential | 54 | 29 | 25 | CyaR, C0719, RNA0-365, RybA, RybB, SraL, SroC, SroD | IsrB, IS128, RprA, RyhB, Spf, SroA, Tff |
Stationary vs. Batch exponential | 76 | 43 | 33 | CyaR, MicF, MicL, RNA0-365, RybA, RybB, SraL, SroC | IsrB, IS128, MgrR, PsrN, PsrO, Spf, SroA, SroG, Tff |