Table 1 Anchoring of C. maxima genome assembly to the genetic map
LG | LG size (cM) | No. anchored scaffolds | Anchored scaffold size (Mb) | % of assembly | No. oriented scaffolds | Oriented scaffold size (Mb) | Recombination rate (cM/Mb) |
|---|---|---|---|---|---|---|---|
1 | 170.74 | 2 | 11.41 | 4.20 | 2 | 11.41 | 14.96 |
2 | 163.50 | 3 | 10.10 | 3.72 | 3 | 10.10 | 16.19 |
3 | 136.74 | 2 | 9.42 | 3.47 | 1 | 6.89 | 19.85 |
4 | 268.01 | 3 | 17.91 | 6.60 | 2 | 17.52 | 15.30 |
5 | 125.60 | 3 | 10.10 | 3.72 | 2 | 9.12 | 13.77 |
6 | 126.97 | 7 | 8.03 | 2.96 | 2 | 5.19 | 24.46 |
7 | 105.35 | 2 | 6.84 | 2.52 | 2 | 6.84 | 15.40 |
8 | 124.16 | 2 | 7.92 | 2.92 | 2 | 7.92 | 15.68 |
9 | 58.93 | 3 | 8.25 | 3.04 | 2 | 7.83 | 7.53 |
10 | 47.61 | 1 | 6.34 | 2.34 | 1 | 6.34 | 7.51 |
11 | 164.98 | 2 | 12.97 | 4.78 | 2 | 12.97 | 12.72 |
12 | 133.66 | 3 | 9.42 | 3.47 | 3 | 9.42 | 14.19 |
13 | 103.82 | 4 | 8.50 | 3.13 | 4 | 8.50 | 12.21 |
14 | 176.36 | 3 | 14.49 | 5.34 | 3 | 14.49 | 12.17 |
15 | 129.60 | 3 | 8.17 | 3.01 | 3 | 8.17 | 15.86 |
16 | 98.78 | 2 | 9.82 | 3.62 | 2 | 9.82 | 10.06 |
17 | 74.59 | 2 | 8.98 | 3.31 | 2 | 8.98 | 8.31 |
18 | 151.41 | 3 | 10.26 | 3.78 | 3 | 10.26 | 14.76 |
19 | 109.07 | 5 | 7.36 | 2.71 | 2 | 4.92 | 22.17 |
20 | 96.94 | 3 | 8.24 | 3.04 | 1 | 6.34 | 15.29 |
Total | 2566.82 | 58 | 194.53 | 71.67 | 44 | 183.03 | 13.19 |