Weeden NF, Robinson RW. Isozyme studies in Cucurbita. In: Bates DM, Robinson RW, Jeffrey C, editors. Biology and utilization of the Cucurbitaceae. NY: Cornell University Press; 1990. p. 51–9.
Google Scholar
Robinson RW, Decker-Walters DS. Cucurbits. New York: CAB International. Crop Prod Sci Hortic; 1997. p. 226.
Google Scholar
Ferriol M, Picó B. Pumpkin and Winter Squash. In Handbook of Plant Breeding Vegetables I Part 4. Volume 1. In: Prohens J, Nuez F, editors. NY: Springer; 2008. p. 317-349.
Alfawaz MA. Chemical composition and oil characteristics of pumpkin (Cucurbita maxima) seed kernels. Res Bult. 2004;129:5–18.
Google Scholar
Stevenson DG, Eller FJ, Wang L, Jane JL, Wang T, Inglett GE. Oil tocopherol content and composition of pumpkin seed oil in 12 cultivars. J Agric Food Chem. 2007;55:4005–13.
Article
PubMed
CAS
Google Scholar
Xing WW, Li L, Gao P, Li H, Shao QS, Shu S, et al. Effects of grafting with pumpkin rootstock on carbohydrate metabolism in cucumber seedlings under Ca (NO3)2 stress. Plant Physiol Bioch. 2015;87:124–32.
Article
CAS
Google Scholar
Wimer J, Inglis D, Miles C. Evaluating grafted watermelon for verticillium wilt severity, yield, and fruit Quality in washington state. HortSci. 2015;50(9):1332–7.
Google Scholar
Yassin SH. Reiview on role of grafting on yield and quality of selected fruit vegetables. Global J Sci Front Res. 2015;15(1). http://www.journalofscience.org/index.php/GJSFR/article/view/1492/1353.
Deleu W, Esteras C, Roig C, González-To M, Fernández-Silva I, Blanca J, et al. A set of EST-SNP for map saturation and cultivar identification in melon. BMC Plant Biol. 2009;9:90.
Article
PubMed
PubMed Central
Google Scholar
Ren Y, Zhang Z, Liu J, Staub JE, Han Y, Cheng Z, et al. An integrated genetic and cytogenetic map of the cucumber genome. PLoS One. 2009;4:e5795.
Article
PubMed
PubMed Central
Google Scholar
Ren Y, Zhao H, Kou Q, Jiang J, Guo S, Zhang H, et al. A high resolution genetic map anchoring scaffolds of the sequenced watermelon genome. PLoS One. 2012;7(1):e29453.
Article
PubMed
CAS
PubMed Central
Google Scholar
Diaz A, Fergany M, Formisano G, Ziarsolo P, Blanca J, Fei Z, et al. A consensus linkage map for molecular markers and Quantitative Trait Loci associated with economically important traits in melon (Cucumis melo L.). BMC Plant Biol. 2011;11:111.
Article
PubMed
CAS
PubMed Central
Google Scholar
Esteras C, Gómez P, Monforte AJ, Blanca J, Vicente-Dólera N, Roig C, et al. High-throughput SNP genotyping in Cucurbita pepo for map construction and quantitative trait loci mapping. BMC Genomics. 2012;13:80.
Article
PubMed
CAS
PubMed Central
Google Scholar
Wei Q, Wang Y, Qin X, Zhang Y, Zhang Z, Wang J, et al. An SNP-based saturated genetic map and QTL analysis of fruit-related traits in cucumber using specific-length amplified fragment (SLAF) sequencing. BMC Genomics. 2014;15:1158.
Article
PubMed
PubMed Central
Google Scholar
Wechter WP, Levi A, Harris KR, Davis AR, Fei Z, Katzir N, et al. Gene expression in developing watermelon fruit. BMC Genomics. 2008;9:275.
Article
PubMed
PubMed Central
Google Scholar
Mascarell-Creus A, Cañizares J, Vilarrasa J, Mora-García S, Blanca J, González-Ibeas D, et al. An oligo-based microarray offers novel transcriptomic approaches for the analysis of pathogen resistance and fruit quality traits in melon (Cucumis melo L.). BMC Genomics. 2009;10:467.
Article
PubMed
PubMed Central
Google Scholar
Dahmani-Mardas F, Troadec C, Boualem A, Lévêque S, Alsadon AA, Aldoss AA, et al. Engineering melon plants with improved fruit shelf life using the TILLING approach. PLoS One. 2010;5(12):e15776.
Article
PubMed
CAS
PubMed Central
Google Scholar
González M, Xu M, Esteras C, Roig C, Monforte AJ, Troadec C. Towards a TILLING platform for functional genomics in Piel de Sapo melons. BMC Res Notes. 2011;4:289.
Article
PubMed
PubMed Central
Google Scholar
Fraenkel R, Kovalski I, Troadec C, Bendahmane A, Perl-Treves R. A TILLING population for cucumber forward and reverse genetics. Cucurbitaceae 2012, Proceedings of the Xth EUCARPIA meeting on genetics and breeding of Cucurbitaceae; 2012 Oct 598–603; Antalya, Turkey.
Guo S, Zheng Y, Joung JG, Liu S, Zhang Z, Crasta OR, et al. Transcriptome sequencing and comparative analysis of cucumber flowers with different sex types. BMC Genomics. 2010;11:384.
Article
PubMed
PubMed Central
Google Scholar
Guo SG, Liu JG, Zheng Y, Huang MY, Zhang HY, Gong GY, et al. Characterization of transcriptome dynamics during watermelon fruit development: sequencing, assembly, annotation and gene expression profiles. BMC Genomics. 2011;12:454.
Article
PubMed
CAS
PubMed Central
Google Scholar
Blanca J, Cañizares J, Ziarsolo P, Esteras C, Mir G, Nuez F, et al. Melon transcriptome characterization. SSRs and SNPs discovery for high throughput genotyping across the species. Plant Genome. 2011;4(2):118–31.
Article
CAS
Google Scholar
Blanca J, Esteras C, Ziarsolo P, Pe’rez D, Fernández V, Collado C. Transcriptome sequencing for SNP discovery across Cucumis melo. BMC Genomics. 2012;13:280.
Article
PubMed
CAS
PubMed Central
Google Scholar
Ando K, Carr KM, Grumet R. Transcriptome analyses of early cucumber fruit growth identifies distinct gene modules associated with phases of development. BMC Genomics. 2012;13:518.
Article
PubMed
CAS
PubMed Central
Google Scholar
Wu TQ, Luo SB, Wang R, Zhong YJ, Xu XM, Lin YE, et al. The first Illumina-based de novo transcriptome sequencing and analysis of pumpkin (Cucurbita moschata Duch.) and SSR marker development. Mol Breeding. 2014;34:1437–47.
Article
CAS
Google Scholar
Huang S, Li R, Zhang Z, Li L, Gu X, Fan W, et al. The genome of the cucumber, Cucumis sativus L. Nat Genet. 2009;41:1275–81.
Article
PubMed
CAS
Google Scholar
Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, González VM, et al. The genome of melon (Cucumis melo L.). Proc Natl Acad Sci U S A. 2012;109(29):11872–7.
Article
PubMed
CAS
PubMed Central
Google Scholar
Guo S, Zhang J, Sun H, Salse J, Lucas WJ, Zhang H, et al. The draft genome of watermelon (Citrullus lanatus) and resequencing of 20 diverse accessions. Nat Genet. 2013;45(1):51–8.
Article
PubMed
CAS
Google Scholar
Yang LM, Li DW, Li YH, Gu XF, Huang SW, Garcia-Mas J, et al. A 1,681-locus consensus genetic map of cultivated cucumber including 67 NB-LRR resistance gene homolog and ten gene loci. BMC Plant Biol. 2013;13:53.
Article
PubMed
CAS
PubMed Central
Google Scholar
Hwang JY, Oh JY, Kim ZH, Staub JE, Chung SM, Park YH. Fine genetic mapping of a locus controlling short internode length in melon (Cucumis melo L.). Mol Breeding. 2014;34(3):949–61.
Article
CAS
Google Scholar
Ren Y, McGregor C, Zhang Y, Gong G, Zhang H, Guo S, et al. An integrated genetic map based on four mapping populations and quantitative trait loci associated with economically important traits in watermelon (Citrullus lanatus). BMC Plant Biol. 2014;14:33.
Article
PubMed
PubMed Central
Google Scholar
Shang Y, Ma Y, Zhou Y, Zhang H, Duan L, Chen H, et al. Biosynthesis, regulation, and domestication of bitterness in cucumber. Science. 2014;28:1084–8.
Article
Google Scholar
Wehner TC, Mitchell SE, Reddy UK. Single nucleotide polymorphisms generated by genotyping by sequencing to characterize genome-wide diversity, linkage disequilibrium, and selective sweeps in cultivated watermelon. BMC Genomics. 2014;15:767.
Article
PubMed
PubMed Central
Google Scholar
Bhawna MZ, Abdin L, Arya L, Verma M. Transferability of cucumber microsatellite markers used for phylogenetic analysis and population structure study in bottle gourd (Lagenaria siceraria (Mol.) Standl.). Appl Biochem Biotechnol. 2015;175(4):2206–23.
Article
PubMed
CAS
Google Scholar
Xanthopoulou A, Ganopoulos I, Kalivas A, Nianiou-Obeidat I, Ralli P, Moysiadis T, et al. Comparative analysis of genetic diversity in Greek Genebank collection of summer squash (Cucurbita pepo) landraces using start codon targeted (SCoT) polymorphism and ISSR markers. Aust J Crop Sci. 2015;9(1):4.
Google Scholar
Xanthopoulou A, Ganopoulos I, Tsaballa A, Nianiou-Obeidat I, Kalivas A, Tsaftaris A, et al. Summer squash identification by High-Resolution-Melting (HRM) analysis using gene-based EST–SSR molecular markers. Plant Mol Biol Rep. 2014;32(2):395–405.
Article
CAS
Google Scholar
Argyris JM, Ruiz-Herrera A, Madriz-Masis P, Sanseverino W, Morata J, Pujol M, et al. Use of targeted SNP selection for an improved anchoring of the melon (Cucumis melo L.) scaffold genome assembly. BMC Genomics. 2015;16(1):4.
Article
PubMed
PubMed Central
Google Scholar
Weeden NF, Robinson RW. Allozyme segregation ratios in the interspecific cross Cucurbita maxima × C. ecuadorensis suggest that hybrid breakdown is not caused by minor alteration in chromosome structure. Genetics. 1986;114:593–609.
PubMed
CAS
PubMed Central
Google Scholar
Singh AK, Singh R, Weeden NF, Robinson RW, Singh NK. A linkage map for Cucurbita maxima based on Randomly Amplified Polymorphic DNA (RAPD) markers. Indian J Horticulture. 2011;68(1):44–50.
Google Scholar
Ge Y, Li X, Yang XX, Cui CS, Qu SP. Genetic linkage map of Cucurbita maxima with molecular and morphological markers. Genet Mol Res. 2015;14(2):5480–4.
Article
PubMed
CAS
Google Scholar
Elshire RJ, Glaubitz JC, Sun Q, Poland JA, Kawamoto K, Buckler ES, et al. A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species. PLoS One. 2011;6(5):e19379.
Article
PubMed
CAS
PubMed Central
Google Scholar
Sandlin K, Prothro J, Heesacker A, Khalilian N, Okashah R, Xiang W, et al. Comparative mapping in watermelon [Citrullus lanatus (Thunb.) Matsum. et Nakai]. Theor Appl Genet. 2012;125(8):1603–18.
Article
PubMed
Google Scholar
Talukder S, Babar M, Vijayalakshmi K, Poland J, Prasad P, Bowden R, et al. Mapping QTL for the traits associated with heat tolerance in wheat (Triticum aestivum L.). BMC Genet. 2014;15(1):97.
Article
PubMed
PubMed Central
Google Scholar
Edelstein M, Paris HS, Nerson H. Dominance of bush growth habit in spaghetti squash (Cucurbita pepo). Euphytica. 1989;43:253–7.
Article
Google Scholar
Paris HS, Edelstein M. Same gene for Bush growth habit in Cucurbita pepo ssp. pepo as in C. pepo ssp. Ovifera. Cucurbit Genet Coop Rep. 2001;24:80–1.
Google Scholar
Cao JS, Yu HF, Ye WZ, Yu XL, Liu LC, Wang YQ, et al. Identification and characterisation of a gibberellin-related dwarf mutant in pumpkin (Cucurbita moschata). J Hortic Sci Biotechnol. 2005;80(1):29–31.
Google Scholar
Li YL, Li HZ, Cui CS, Zhang HY, Gong GY. Molecular markers linked to the dwarf gene in squash. J Agr Biotech. 2007;15(2):279–82.
CAS
Google Scholar
Wu T, Zhou JH, Zhang YF, Cao JS. Characterization and inheritance of a bush-type in tropical pumpkin (Cucurbita moschata Duchesne). Sci Hortic. 2007;114(1):1–4.
Article
Google Scholar
Wu T, Cao JS. Molecular cloning and expression of a bush related CmV1 gene in tropical pumpkin. Mol Bio Rep. 2010;37:649–52.
Article
CAS
Google Scholar
Wang SH, Li HZ, Zhang ZH, He J, Jia CC, Zhang F, et al. Comparative Mapping of the Dwarf Gene Bu from Tropical Pumpkin (Cucurbita moschata Duchesne). Acta Horticulturae Sinica. 2011;38(1):95–100.
CAS
Google Scholar
Singh D. Inheritance of certain economic characters in the squash, Cucurbita maxima Duch. Minnesota. Minn Agr Exp Sta Tech Bul. 1949;186:30.
Google Scholar
Denna DW, Munger HM. Morphology of the bush and vine habits and the allelism of the bush genes in Cucurbita maxima and C. pepo squash. Proc Am Soc Hortic Sci. 1963;82:370–7.
Google Scholar
Wang R, Huang H, Lin Y, Chen Q, Liang Z. Wu, T. Genetic and gene expression analysis of dm1, a dwarf mutant from Cucurbita maxima Duch. ex Lam, based on the AFLP method. Can J Plant Sci. 2014;94(2):293–302.
Article
CAS
Google Scholar
Li Y, Yang L, Pathak M, Li D, He X, Weng Y. Fine genetic mapping of cp: a recessive gene for compact (dwarf) plant architecture in cucumber, Cucumis sativus L. Theor Appl Genet. 2011;12:973–83.
Article
Google Scholar
Gao ZY, Zhao SC, He WM, Guo LB, Peng YL, Wang JJ, et al. Dissecting yield-associated loci in super hybrid rice by resequencing recombinant inbred lines and improving parental genome sequences. Proc Natl Acad Sci U S A. 2013;110(35):14492–7.
Article
PubMed
CAS
PubMed Central
Google Scholar
Olszewski N, Sun T, Gubler F. Gibberellin signaling: biosynthesis, catabolism, and response pathways. Plant Cell. 2002;14:S61–80.
PubMed
CAS
PubMed Central
Google Scholar
Spielmeyer W, Ellis MH, Chandler PM. Semidwarf (sd-1), “green revolution” rice, contains a defective gibberellin 20-oxidase gene. Proc Natl Acad Sci U S A. 2002;99:9043–8.
Article
PubMed
CAS
PubMed Central
Google Scholar
Sakamoto T, Miura K, Itoh H, Tatsumi T, Ueguchi-Tanaka M, Ishiyama K, et al. An overview of gibberellin metabolism enzyme genes and their related mutants in rice. Plant Physiol. 2004;134:1642–53.
Article
PubMed
CAS
PubMed Central
Google Scholar
Peter H, Stephen GT. Gibberellin biosynthesis and its regulation. Biochem J. 2012;444:11–25.
Article
Google Scholar
Yamaguchi S. Gibberellin metabolism and its regulation. Annu Rev Plant Biol. 2008;59:225–51.
Article
PubMed
CAS
Google Scholar
Farrow SC, Facchini PJ. Functional diversity of 2-oxoglutarate/Fe (II)-dependent dioxygenases in plant metabolism. Front Plant Sci. 2014;5:524.
Article
PubMed
PubMed Central
Google Scholar
Brown RN, Myers JR. A genetic map of squash (Cucurbita sp.) with randomly amplified polymorphic DNA markers and morphological markers. J Am Soc Hortic Sci. 2002;127(4):568–75.
CAS
Google Scholar
Zraidi A, Stift G, Pachner M, Shojaeiyan A, Gong L, Lelley T. A consensus map for Cucurbita pepo. Mol Breeding. 2007;20(4):375–88.
Article
CAS
Google Scholar
Gong L, Pachner M, Kalai K, Lelley T. SSR-based genetic linkage map of Cucurbita moschata and its synteny with Cucurbita pepo. Genome. 2008;51(11):878–87.
Article
PubMed
CAS
Google Scholar
Gong L, Stift G, Kofler R, Pachner M, Lelley T. Microsatellites for the genus Cucurbita and an SSR-based genetic linkage map of Cucurbita pepo L. Theor Appl Genet. 2008;117(1):37–48.
Article
PubMed
CAS
PubMed Central
Google Scholar
Paillard S, Schnurbusch T, Winzeler M, Messmer M, Sourdille P, Abderhalden O, et al. An integrative genetic linkage map of winter wheat (Triticum aestivum L.). Theor Appl Genet. 2003;107:1235–42.
Article
PubMed
CAS
Google Scholar
Alheit KV, Reif JC, Maurer HP, Hahn V, Weissmann EA, Miedaner T, et al. Detection of segregation distortion loci in triticale (× Triticosecale Wittmack) based on a high-density DArT marker consensus genetic linkage map. BMC Genomics. 2011;12:380.
Article
PubMed
CAS
PubMed Central
Google Scholar
Francki MG, Walker E, Crawford AC, Broughton S, Ohm HW, Barclay I, et al. Comparison of genetic and cytogenetic maps of hexaploid wheat (Triticum aestivum L.) using SSR and DArT markers. Mol Genet Genomics. 2009;281:181–91.
Article
PubMed
CAS
Google Scholar
Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, et al. The genome of Theobroma cacao. Nat Genet. 2010;43:101–8.
Article
PubMed
Google Scholar
Velasco R, Zharkikh A, Affourtit J, Dhingra A, Cestaro A, Kalyanaraman A, et al. The genome of the domesticated apple (Malus × domestica Borkh.). Nat Genet. 2010;42:833–9.
Article
PubMed
CAS
Google Scholar
Jaillon O, Aury JM, Noel B, Policriti A, Clepet C, Casagrande A, et al. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Nature. 2007;449:463–7.
Article
PubMed
CAS
Google Scholar
Hyten DL, Cannon SB, Song Q, Weeks N, Fickus EW, Shoemaker RC, et al. High-throughput SNP discovery through deep resequencing of a reduced representation library to anchor and orient scaffolds in the soybean whole genome sequence. BMC Genomics. 2010;11:38.
Article
PubMed
PubMed Central
Google Scholar
Shulaev V, Sargent DJ, Crowhurst RN, Mockler TC, Folkerts O, Delcher AL, et al. The genome of woodland strawberry (Fragaria vesca). Nat Genet. 2010;43:109–16.
Article
PubMed
PubMed Central
Google Scholar
Xu YL, Li L, Wu K, Peeters AJ, Gage DA, Zeevaart JA. The GA5 locus of Arabidopsis thaliana encodes a multifunctional gibberellin 20-oxidase: molecular cloning and functional expression. Proc Natl Acad Sci U S A. 1995;92(14):6640–4.
Article
PubMed
CAS
PubMed Central
Google Scholar
Qiao F, Zhao KJ. The influence of RNAi targeting of OsGA20ox2 gene on plant height in rice. Plant Mol Bio Rep. 2011;29(4):952–60.
Article
CAS
Google Scholar
Shifriss O. Developmental reversal of dominance in Cucurbita pepo. Proc Amer Soc Hort Sci. 1947;50:330–46.
Google Scholar
Glaubitz JC, Casstevens TM, Lu F, Harriman J, Elshire RJ, Sun Q, et al. TASSEL-GBS: A High Capacity Genotyping by Sequencing Analysis Pipeline. PLoS One. 2014;9(2):e90346.
Article
PubMed
PubMed Central
Google Scholar
Li H, Durbin R. Fast and accurate short read alignment with Burrows–Wheeler transform. Bioinformatics. 2009;25(14):1754–60.
Article
PubMed
CAS
PubMed Central
Google Scholar
Van Ooijen JW. Joinmap 4: Software for the calculation of genetic linkage maps in experimental populations. Kyazma BV, Wageningen, Netherlands. 2006.
Li H, Ye G, Wang J. A modified algorithm for the improvement of composite interval mapping. Genetics. 2007;175:361–74.
Article
PubMed
PubMed Central
Google Scholar
Bolger AM, Lohse M, Usadel B. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics. 2014;30:2114–20.
Article
PubMed
CAS
PubMed Central
Google Scholar
Zhang Z, Mao L, Chen H, Bu F, Li G, Sun J, et al. Genome-wide mapping of structural variations reveals a copy number variant that determines reproductive morphology in cucumber. Plant Cell. 2015;27:1595–604.
Article
PubMed
CAS
Google Scholar
Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, et al. Clustal W and Clustal X version 2.0. Bioinformatics. 2007;23(21):2947–8.
Article
PubMed
CAS
Google Scholar
Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol. 2011;28:2731–9.
Article
PubMed
CAS
PubMed Central
Google Scholar
Sparkes IA, Runions J, Kearns A, Hawes C. Rapid, transient expression of fluorescent fusion proteins in tobacco plants and generation of stably transformed plants. Nat Protoc. 2006;1(4):2019–25.
Article
PubMed
CAS
Google Scholar