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Table 7 List of BLAST hits for mitochondrial ORFans in freshwater mussels searched against NCBI NRDB mitochondrial proteins

From: In silico analyses of mitochondrial ORFans in freshwater mussels (Bivalvia: Unionoida) provide a framework for future studies of their origin and function

Species Name

M-ORFs

F-ORFs

H-ORFs

Anodonta anatina

NAD7 (0.61)

---

 

---

atp9 (0.19)

Cumberlandia monodonta

ATP8 (0.81)

---

 

---

nad2 (6e-08)

Hyridella menziesi

ATP8 (0.61)

NAD2 (0.33)

 

nad4 (6e-04)

nad2 (0.022)

Lasmigona complanata

 

---

 

nad2 (0.094)

Lasmigona compressa

  

F-ORF (4e-05)

f-orf (2e-05)

Lasmigona subviridis

  

F-ORF (6e-09)

f-orf (2e-05)

nad1 (0.64)

Inversidens japanensis

ATP8 (0.62)

---

 

nad5 (0.001)

nad2 (0.22)

atp8 (0.048)

cox1 (0.15)

Margaritifera falcata

  

COX1 (0.94)

---

Margaritifera margaritifera

 

NAD5 (0.093)

 

NAD2 (0.23)

nad2 (0.15)

Pyganodon grandis

NAD5 (0.046)

---

 

atp9 (0.30)

cytb (0.13)

Quadrula quadrula

NAD5 (0.026)

NAD5 (0.31)

 

ATP8 (0.070)

nad2 (0.56)

atp9 (0.30)

Solenaia carinatus

COX1 (0.41)

---

 

NAD5 (0.99)

nad2 (0.018)

nad5 (0.33)

Toxolasma lividus

 

---

 

---

Toxolasma parvum

  

F-ORF (0.020)

---

Utterbackia imbecillis

  

---

nad2 (0.061)

Utterbackia peninsularis

NAD5 (0.38)

---

 

nad2 (0.31)

cox1 (0.056)

Venustaconcha ellipsiformis

NAD4 (0.19)

NAD4 (0.55)

 

CYTB (0.21)

nad2 (0.14)

ATP8 (0.94)

nad4 (0.15)

  1. Note: Protein name and (e-values <1.0) identified using PSI-BLAST and tBLASTx are indicated above in capital letters and below in italics, respectively. Hits to freshwater mussel mitochondrial ORF homologs are not presented, except for the highly divergent H-ORFs