From: Gene expression profile of intramuscular muscle in Nellore cattle with extreme values of fatty acid
Ensembl_gene_ID | Gene symbol | BTA: locus | Function | FA | Fold change | q value |
---|---|---|---|---|---|---|
ENSBTAG00000033803 | FABP7 | 9:28834077–28837863 | Cytosolic fatty-acid and lipid binding | C18:3 n3 | 27.891 | 0.010 |
ENSBTAG00000022570 | LOC782922 | 13:43947620–44116989 | Fatty acid metabolic process | MUFA | −2.100 | 0.007 |
ENSBTAG00000004860 | SLC27A6 | 7:26237928–26329594 | Fatty acid transporter | MUFA | 0.855 | 0.004 |
ENSBTAG00000012885 | ACAT1 | 15:17999931–18028984 | Fatty acid metabolism, Synthesis and degradation of ketone bodies | n6 | 0.444 | 0.047 |
ENSBTAG00000005105 | PAFAH2 | 2:127684836–127720396 | Lipid catabolic process | C18:0 | −0.750 | 0.050 |
ENSBTAG00000022449 | SCD5_BOVIN | 6:99233278–99410753 | Fatty acid metabolic process; fatty acid, unsaturated fatty acid and lipid biosynthetic process | C18:0 | 0.821 | 0.030 |
ENSBTAG00000001444 | TNXB | 23:27083668–27136954 | Fatty acid metabolism | C18:1cis-9 | −0.640 | 0.004 |
ENSBTAG00000006716 | PTGS1 | 11:93219286–93245045 | Fatty acid metabolic process; fatty acid and unsaturated fatty acid biosynthetic process | C18:1cis-9 | −0.824 | 0.010 |
ENSBTAG00000007763 | SLC1A4 | 11:63290421–63395507 | Carboxylic acid transport | C18:0 | −1.502 | 0.006 |
ENSBTAG00000015228 | CD74 | 7:63748884–63756646 | Organic acid and lipid biosynthetic process | C18:0 | 0.605 | 0.033 |
ENSBTAG00000016819 | FABP3 | 2:122723224–122783830 | Cytosolic fatty-acid and lipid binding | PUFA/SFA | 0.895 | 0.011 |
ENSBTAG00000011917 | GPAM | 26:32963413–33003349 | Fatty acid metabolic process | PUFA/SFA | −0.664 | 0.011 |
ENSBTAG00000018248 | MGLL | 22:60443563–60493810 | Lipid metabolism | PUFA/SFA | −0.620 | 0.011 |
ENSBTAG00000038321 | LIPE | 18:51216018–51227395 | Lipid catabolic process, and Insulin signaling pathway | PUFA/SFA | −0.620 | 0.011 |
ENSBTAG00000004178 | ACOX2 | 22:43379503–43410315 | Metabolic and catabolic process, beta-oxidation of fatty acid, lipid catabolic process and organic acid catabolic process | n6 | −0.486 | 0.025 |
ENSBTAG00000008063 | PPARA | 5:117151548–117233112 | Fatty acid metabolic process | n6 | −0.534 | 0.003 |
ENSBTAG00000017542 | PPARD | 23:9340954–9353750 | metabolic and catabolic process, beta-oxitation, transport and oxidation of fatty acids | n6 | −0.643 | 0.011 |
ENSBTAG00000033089 | PTPLA | 13:32347675–32369621 | Biosynthesis of unsaturated fatty acids | ω6 | 0.500 | 0.016 |
ENSBTAG00000007331 | PLOD2 | 1:123322466–123444003 | Carboxylic acid binding | C18:2cis-9cis-12 PUFA | 0.886 0.975 | 0.013 0.008 |
ENSBTAG00000001417 | ACSM1 | 25:18349701–18413889 | Metabolic and biosynthetic process of fatty acid; biosynthetic process of lipid, organic acid and carboxylic acid. | n3 n6 | −176.413 −132.855 | 0.013 0.006 |
ENSBTAG00000019813 | ADIPOQ | 1:81005167–81018328 | Metabolic and catabolic process, beta-oxidation and oxidation and regulation of metabolic of fatty acid | n3 n6 | −118.366 −0.900 | 0.013 0.005 |
ENSBTAG00000037526 | FABP4 | 14:46833664–46838053 | Cytosolic fatty-acid binding | n3 ω6 | −135.344 −0.927 | 0.013 0.016 |
ENSBTAG00000001154 | DGAT2 | 15:55940756–55973229 | Lipid biosynthetic process | C18:2cis-9cis-12 C16:0 PUFA/SFA | −0.626 0.654 −0.960 | 0.025 0.031 0.011 |
ENSBTAG00000021287 | SLC16A7 | 5:53987908–54214799 | Monocarboxylic acid transmembrane transporter activity | C14:0 C18:0 n3 | 0.816 0.860 −167.220 | 0.040 0.018 0.013 |
ENSBTAG00000005259 | UCP3 | 15:54213565–54224051 | Fatty acid metabolic process | C18:1cis-9 MUFA n6 | 0.615 0.855 −0.735 | 0.023 0.004 0.002 |
ENSBTAG00000016864 | LBP | 13:67874473–67910095 | Lipid transport | C14:0 C16:0 SFA | 1.950 1.880 186.970 | 0.040 0.006 0.014 |
ENSBTAG00000012855 | LPL | 8:67481088–67511227 | Metabolic and biosynthetic process of fatty acid | C16:0 C18:1cis-9 PUFA/SFA n3 | 0.870 −0.568 −114.732 −0.841 | 0.02 0.033 0.011 0.042 |
ENSBTAG00000015978 | ANXA1 | 8:49624472–49642916 | Transport of lipid, monocarboxylic acid, organic acid, fatty acid, long-chain fatty acid and carboxylic acid; arachidonic acid secretion | C18:0 C18:1cis-9 MUFA PUFA n6 | 0.826 −0.891 −0.740 0.717 0.646 | 0.006 0.004 0.004 0.008 0.002 |
ENSBTAG00000006447 | ACSM3 | 25:18605634–18656582 | Lipid metabolism | C18:2cis-9cis-12 MUFA PUFA SFA n3 | −1.853 2.455 −1.965 −19.001 −173.510 | 0.012 0.004 0.008 0.033 0.023 |
ENSBTAG00000004281 | ACSS1 | 13:42963403–43076853 | Acetyl-CoA metabolic process | C14:0 C16:0 C18:0 C18:1cis-9 SFA n3 | 1.184 1.088 1.531 −1.180 122.248 −147.662 | 0.040 0.043 0.006 0.032 0.033 0.013 |
ENSBTAG00000016514 | CPE | 17:546397–697915 | Insulin processing | C14:0 C16:0 C18:1cis-9 SFA MUFA n3 | 1.490 1.683 −1.399 139.560 −1.279 −101.4 | 0.040 0.006 0.038 0.014 0.004 0.049 |
ENSBTAG00000000448 | BDH1 | 1:72572940–72608810 | Synthesis and degradation of ketone bodies | C14:0 C16:0 C18:0 SFA C18:2cis-9cis-12 MUFA n3 | 1.045 1.212 1.534 105.874 −0.854 −0.925 −174.448 | 0.040 0.020 0.006 0.014 0.043 0.004 0.013 |