Fig. 2

Circular plot showing the redundancy between single-dose markers from four pseudo-references (methyl-filtered sugarcane genome, Sorghum bicolor genome, RNA-seq sugarcane transcriptome and SUCEST project sequences) that were used to align the GBS sugarcane tags. The red regions represent redundancy within each pseudo-reference, whereas the green, orange and blue regions represent redundancy between four, three and two pseudo-references, respectively. The remaining grey regions represent loci that are unique to each pseudo-reference