Table 3 Map information based on high quality SLAFs obtained from population sequencing
From: Construction of a high-density genetic map using specific-locus amplified fragments in sorghum
Linkage groups | Marker types and numbers | Total distance (cM) | Average distance between markers (cM) | Largest gap (cM) | Gap < =5 (%) | |||
|---|---|---|---|---|---|---|---|---|
Total | SNP only | InDel only | SNP & InDel | |||||
1 | 200 | 199 | 1 | 0 | 238.7 | 1.20 | 14.1 | 97.5 |
2 | 292 | 290 | 0 | 2 | 287.9 | 0.99 | 8.5 | 99.0 |
3 | 250 | 249 | 0 | 1 | 286.7 | 1.15 | 7.4 | 98.4 |
4 | 315 | 314 | 0 | 1 | 300.4 | 0.96 | 13.7 | 98.1 |
5 | 218 | 217 | 1 | 0 | 183.7 | 0.85 | 9.4 | 97.2 |
6 | 216 | 213 | 1 | 2 | 175.0 | 0.81 | 10.7 | 98.1 |
7 | 217 | 217 | 0 | 0 | 266.3 | 1.23 | 15.7 | 96.3 |
8 | 189 | 189 | 0 | 0 | 134.6 | 0.72 | 8.6 | 98.9 |
9 | 123 | 123 | 0 | 0 | 152.2 | 1.25 | 4.3 | 100.0 |
10 | 226 | 226 | 0 | 0 | 132.8 | 0.59 | 9.7 | 97. 8 |
Total | 2246 | 2237 | 3 | 6 | 2158.1 | 0.98 | 10.2 | 98.1 |