Skip to main content

Table 1 The number of sequenced reads mapped to the SBS and sham zebrafish intestine

From: Short bowel syndrome results in increased gene expression associated with proliferation, inflammation, bile acid synthesis and immune system activation: RNA sequencing a zebrafish SBS model

Sample ID

Raw reads

Raw combined

Clean reads (percentage)

Mapped reads (percentage)

Sham 1

4.80E + 07

6.70E + 07

65982094 (98.06%)

63078706 (95.60%)

Sham 2

4.40E + 07

6.20E + 07

60497171 (97.63%)

56858850 (93.99%)

Sham 3

4.80E + 07

6.80E + 07

67161466 (98.13%)

64522681 (96.07%)

SBS 1

1.90E + 07

3.70E + 07

36112322 (96.71)

33326196 (92.28%)

SBS 2

4.70E + 07

6.60E + 07

65338859 (98.58%)

61739067 (94.49%)

SBS 3

4.60E + 07

6.50E + 07

63391449 (97.98%)

59498306 (93.86%)