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Fig. 4 | BMC Genomics

Fig. 4

From: Estimating genomic diversity and population differentiation – an empirical comparison of microsatellite and SNP variation in Arabidopsis halleri

Fig. 4

Comparison of pairwise population genetic differentiation (F ST) among nine populations of Arabidopsis halleri estimated with different genetic markers. a Comparison of F ST derived from 2,178,204 genome-wide SNPs with F ST inferred on the basis of all 19 microsatellite markers (filled circles), and separately for 12 cross-species (open triangles), and seven species-specific microsatellites (open squares). Given are correlation coefficients (r MT) and p-values from Mantel tests. b Estimates of F ST inferred from SNPs were significantly lower than those based on microsatellites (p < 0.0001, paired t-test)

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BMC Genomics

ISSN: 1471-2164

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