Skip to main content

Table 3 The top 20 ranked most differentially expressed unigenes between normal and flooding conditions

From: Transcriptome profiling of the floating-leaved aquatic plant Nymphoides peltata in response to flooding stress

Unigene ID

Log2FC

FDR

Swissprot annotation

d2.comp62123_c2_seq4

13.94

5.99E-20

Chlorophyll a-b binding protein

d2.comp52108_c0_seq2

13.78

9.43E-20

Auxin-induced in root cultures protein

d2.comp54965_c0_seq2

13.09

5.46E-18

Proline-rich protein 4

d2.comp53053_c0_seq1

12.78

2.03E-17

Kirola

d2.comp66621_c0_seq4

12.71

2.94E-17

Protein da1-related 1

d2.comp60426_c0_seq5

12.68

3.27E-17

Benzyl alcohol 0-benzoyltransferase

d2.comp57055_c0_seq2

12.16

7.80E-16

mitochondrial chaperone bcs1

d2.comp61187_c1_seq1

11.68

1.84E-14

Glyceraldehyde 3-phosphate dehydrogenase chloroplastic

d2.comp56332_c0_seq2

11.58

3.11E-14

Heat shock cognate 70 kda protein 2

d2.comp58962_c0_seq1

11.57

3.22E-14

Cluminal-binding protein 4

d2.comp61381_c0_seq1

11.42

6.45E-14

Heat shock cognate protein 80

d2.comp63783_c0_seq1

11.37

9.00E-14

L-ascorbate oxidase homolog

d2.comp62781_c0_seq1

11.29

1.42E-13

Probable ferric reduction oxidase 1

d2.comp57757_c0_seq1

11.28

1.45E-13

40s ribosomal protein s2-2

d2.comp62067_c0_seq1

11.27

1.50E-13

Carrier protein chloroplastic

d2.comp59687_c0_seq1

11.12

3.92E-13

Uncharacterized protein At1g08160

d2.comp54780_c1_seq1

11.11

4.24E-13

Elongation factor 1-alpha

d2.comp57273_c0_seq1

11.03

6.61E-13

Chlorophyll a-b binding protein

d2.comp54437_c2_seq1

11.02

6.61E-13

Peroxidase 27

d2.comp55364_c0_seq2

11.00

7.07E-13

Ribulose bisphosphate carboxylase

  1. Note: Log2FC was estimated by the difference between Log2(FPKM of TS sample) and Log2(FPKM of US sample). FDR: p value corrected by false discovery rate at 5%