Table 4 List of the top differentially regulated KOs in the sample groups
Treatments | KO ID | All genes | DEGs | p-value | FDR | Description |
|---|---|---|---|---|---|---|
HO6 vs. Wat6 up-regulated | ko04744 | 11 | 4 | 0.002 | 0.176 | purine metabolism |
ko00073 | 12 | 4 | 0.003 | 0.176 | cutin, suberine and wax biosynthesis | |
ko03030 | 47 | 8 | 0.004 | 0.176 | DNA replication | |
ko04141 | 145 | 16 | 0.007 | 0.247 | protein processing in endoplasmic reticulum | |
ko00500 | 119 | 13 | 0.016 | 0.402 | starch and sucrose metabolism | |
HO6 vs. Wat6 down-regulated | ko00190 | 143 | 21 | 0.000 | 0.000 | oxidative phosphorylation |
ko00360 | 57 | 8 | 0.001 | 0.008 | phenylalanine metabolism | |
ko00195 | 53 | 7 | 0.002 | 0.021 | photosynthesis | |
ko00941 | 17 | 4 | 0.002 | 0.023 | flavonoid biosynthesis | |
ko04075 | 130 | 10 | 0.012 | 0.096 | plant hormone signal transduction | |
HO24 vs. Wat24 up-regulated | ko00480 | 39 | 9 | 0.000 | 0.000 | glutathione metabolism |
ko01230 | 29 | 7 | 0.000 | 0.002 | biosynthesis of amino acids | |
ko04141 | 145 | 13 | 0.001 | 0.026 | protein processing in endoplasmic reticulum | |
ko00910 | 31 | 5 | 0.003 | 0.066 | nitrogen metabolism | |
HO24 vs. Wat24 down-regulated | ko03010 | 337 | 116 | 0.000 | 0.000 | ribosome |
ko00940 | 69 | 9 | 0.006 | 0.290 | phenylpropanoid biosynthesis | |
ko00908 | 11 | 3 | 0.014 | 0.535 | zeatin biosynthesis | |
ko00073 | 12 | 3 | 0.018 | 0.551 | cutin, suberine and wax biosynthesis | |
HO24 vs. HO6 up-regulated | ko00940 | 69 | 21 | 0.000 | 0.000 | phenylpropanoid biosynthesis |
ko04110 | 94 | 22 | 0.000 | 0.000 | cell cycle | |
ko00360 | 57 | 16 | 0.000 | 0.000 | phenylalanine metabolism | |
ko04626 | 77 | 15 | 0.000 | 0.008 | plant-pathogen interaction | |
ko00480 | 63 | 13 | 0.001 | 0.009 | glutathione metabolism | |
ko00903 | 25 | 7 | 0.002 | 0.021 | limonene and pinene degradation | |
HO24 vs. HO6 down-regulated | ko00904 | 8 | 6 | 0.000 | 0.001 | diterpenoid biosynthesis |
ko00500 | 119 | 21 | 0.000 | 0.009 | starch and sucrose metabolism | |
ko04712 | 23 | 8 | 0.000 | 0.009 | circadian rhythm - plant | |
ko04075 | 130 | 21 | 0.000 | 0.014 | plant hormone signal transduction | |
ko00592 | 26 | 8 | 0.000 | 0.014 | α-linolenic acid metabolism | |
ko00909 | 7 | 4 | 0.001 | 0.029 | sesquiterpenoid and triterpenoid biosynthesis |