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Table 1 Functional analysis of significantly regulated genes across transcriptome datasets

From: Unity in defence: honeybee workers exhibit conserved molecular responses to diverse pathogens

Groups

GO terms

p-value

All significantly regulated genes

extracellular region

1.3E-06

metabolic process

3.2E-04

electron carrier activity

3.6E-04

cellular protein modification process

3.6E-04

response to biotic stimulus

3.2E-03

protein complex

6.5E-03

nucleus

1.4E-02

carbohydrate metabolic process

1.4E-02

nucleobase-containing compound metabolic process

1.4E-02

catalytic activity

1.4E-02

nucleotide binding

1.4E-02

nucleic acid binding

1.6E-02

regulation of biological process

1.6E-02

protein kinase activity

2.3E-02

transporter activity

2.9E-02

signal transduction

3.0E-02

cell cycle

3.0E-02

Up-regulated

no significant terms

 

Down-regulated

extracellular region

1.1E-05

regulation of biological process

6.4E-03

response to biotic stimulus

6.4E-03

electron carrier activity

1.0E-02

metabolic process

1.9E-02

nucleotide binding

4.9E-02

Differentially-regulated

metabolic process

1.5E-02

catalytic activity

1.5E-02

extracellular region

1.5E-02

electron carrier activity

1.5E-02

cellular protein modification process

3.7E-02

  1. This table shows the overrepresented GOslim terms for all regulated genes (344 genes) and the categories; up-regulated, down-regulated and differentially-regulated. Note that no overrepresented GO term was obtained for up-regulated genes. Gene lists corresponding to these GO terms are available in Additional file 2: Tables ST1-ST3