From: Tissue and time specific expression pattern of interferon regulated genes in the chicken
Gene symbol | Gene description | Maximal FC | Timepoint of maximal FC | cIRG | Expression in lung | # of Promotor elements (ISRE/GAS) |
---|---|---|---|---|---|---|
A) | ||||||
PTX3 | Pentraxin related gene, rapidly induced by IL1 beta | 685 | 3 h | x | x | 0/7 |
SFTPA1 | Surfactant, pulmonary-associated protein A1 | −436 | 9 h | x | - | 0/12 |
LOC396260 | Mature avidin | 384 | 9 h | - | x | 1/7 |
IL6 | Interleukin-6 | 186 | 3 h | x | x | 0/8 |
LAO | L-amino-acid oxidase precursor (Interleukin-4 induced 1) | 169 | 3 h | - | x | 0/7 |
K203 | Chicken chemokine (C-C motif) L i 3 | 145 | 3 h | - | x | 0/6 |
LL | Lung lectin | −140 | 9 h | - | - | 0/12 |
PSCA | Prostate stem cell antigen | −124 | 9 h | - | - | 0/12 |
KCNA1 | Potassium voltage-gated channel, shaker-related subfamily, member 1 | −69 | 3 h | - | - | 0/5 |
LYG2 | Lysozyme G-like 2 | 62 | 3 h | - | x | 0/6 |
CSF3 | Colony stimulating factor 3 | 58 | 3 h | x | x | 0/3 |
NEFH | Neurofilament, heavy polypeptide | −56 | 3 h | - | - | 0/5 |
CMBL | Carboxymethylenebutenolidase homolog | 44 | 3 h | - | x | 0/12 |
GCH1 | GTP cyclohydrolase 1 | 43 | 3 h | x | x | 0/9 |
FSHR | Follicle stimulating hormone receptor | −39 | 3 h | - | - | 0/5 |
ZPD | Zona pellucida protein D | 38 | 3 h | - | - | 0/13 |
IRG1 | Immunoresponsive 1 homolog | 35 | 3 h | - | x | 0/9 |
BATF3 | Basic leucine zipper transcription factor, ATF-like 3 | 35 | 3 h | - | x | 0/11 |
IL22 | Interleukin-22 | 34 | 3 h | x | x | 0/4 |
MAOA | Monoamine oxidase A | 33 | 9 h | - | x | 0/11 |
HPS5 | Hermansky Pudlak syndrome 5 | 30 | 6 h | x | x | 0/10 |
ETV1 | ETS variant gene 1 | −30 | 3 h | - | - | 0/13 |
TULP1 | Tubby like protein 1 | 28 | 3 h | - | x | 0/11 |
MMP1 | Matrix metallopeptidase 1 (interstitial collagenase) | 27 | 3 h | - | x | 1/7 |
LIPI | Lipase, member I | 26 | 3 h | - | x | 1/9 |
RPL37 | Ribosomal protein L37 | 26 | 3 h | x | x | 0/9 |
GBP | Guanylate binding protein | 25 | 3 h | x | x | 0/5 |
OAS | 2‘5’oligoadenylate synthetase like | 25 | 3 h | x | x | 0/0 |
SPINK5 | Serine peptidase inhibitor, Kazal type 5 | −25 | 6 h | - | - | 0/7 |
Mx1 | Myxovirus (influenza virus) resistance-1 | 24 | 3 h | x | x | 1/16 |
B) | ||||||
TULP1 | Tubby like protein 1 | 118 | 3 h | - | x | 0/11 |
IL6 | Interleukin-6 | 67 | 9 h | x | x | 0/8 |
CMBL | Carboxymethylenebutenolidase homolog | 53 | 3 h | - | x | 0/12 |
LOC396260 | Mature avidin | 44 | 9 h | - | x | 1/7 |
LAO | L-amino-acid oxidase precursor | 40 | 3 h | - | x | 0/7 |
MSC | Musculin (activated B-cell factor-1) | 33 | 3 h | - | x | 0/5 |
FKBP5 | FK506 binding protein 5 | 30 | 3 h | x | x | 0/6 |
TGM4 | Transglutaminase 4 (prostate) | 24 | 3 h | - | - | 0/10 |
LYG2 | Lysozyme G-like 2 | 24 | 3 h | - | x | 0/6 |
BATF3 | Basic leucine zipper transcription factor, ATF-like 3 | 22 | 3 h | - | x | 0/11 |
GBP | Guanylate binding protein | 22 | 3 h | x | x | 0/5 |
RPL37 | Ribosomal protein L37 | 20 | 3 + 9 h | x | x | 0/9 |
IFIT-5 | Interferon induced protein with tetratricopeptide repeats 5 | 18 | 3 + 9 h | x | x | 1/9 |
IRG1 | Immunoresponsive 1 homolog | 19 | 9 h | - | x | 0/9 |
TLR5 | Toll-like receptor-5 | −18 | 3 h | x | - | 0/11 |
SEMA6D | −17 | 3 h | - | x | 0/11 | |
GCH1 | GTP cyclohydrolase 1 | 17 | 3 h | x | x | 0/9 |
GAL9 | Gallicin 9 | 16 | 3 h | - | - | 0/8 |
Rd | Riboflavin-binding protein | 16 | 3 h | - | - | 0/15 |
MAOA | Monoamine oxidase A | 16 | 9 h | - | x | 0/11 |
SAMD9L | Sterile alpha motif domain containing 9 like | 15 | 3 + 9 h | x | x | 0/13 |
K203 | Chicken chemokine (C-C motif) L i 3 | 14 | 9 h | - | x | 0/6 |
IL1RL1 | Interleukin-1 receptor like 1 | 14 | 3 h | x | x | 0/15 |
MX1 | Myxovirus (influenza virus) resistance-1 | 13 | 3 + 6 + 9 h | x | x | 1/16 |
SOCS3 | Suppressor of cytokine signaling 3 | 12 | 9 h | x | x | 1/9 |
RASD1 | RAS, dexamethasone induced 1 | 12 | 3 h | - | x | 0/3 |
OAS | 2‘5’oligoadenylate synthetase like protein | 11 | 3 h | x | x | 0/0 |
ALB | Albumin | 10 | 3 h | - | - | 0/12 |
PDK4 | Pyruvate dehydrogenase kinase, isozyme 4 | 10 | 3 h | x | x | 0/12 |
SNAP25 | Synaptosomal-associated protein, 25 kDa | −10 | 3 h | x | - | 0/19 |