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Table 4 Evaluation of scaffolds generated by SALSA and LACHESIS for Capra hircus assembly generated using optical map data

From: Scaffolding of long read assemblies using long range contact information

Metric SALSA LACHESIS
Number of scaffolds 90 596
Total bases 2.22 Gb 2.61 Gb
NG50 87.74 Mb 87.34 Mb
% Aligned bases 97.00% 99.91%
Breakpoints 10718 14741
Relocations 118 167
Translocations 185 407
Inversions 130 126