Table 3 Genome and predicted protein statistics. Percentages of total genome size calculated as proportion of assembly size rather than estimated genome size
Attribute | Value | % of Total |
|---|---|---|
Genome size (Gbp) | 3.44 | |
DNA coding (bp) | 10,400,226 | 0.41% |
DNA G + C (bp) | 1,059,229,091 | 41.3% |
Number of scaffolds | 997,976 | |
Scaffold N50 (bp) | 5425 | |
Number of contigs | 1,213,000 | |
Contig N50 (bp) | 5304 | |
Protein coding genes | 19,384 | |
Genes with function prediction | 5380 | 27.8% |
Genes assigned to KOGs | 7038 | 36.3% |
Genes with Pfam domains | 6612 | 34.1% |