Table 8 The 25 most highly represented PFAM conserved domains in the Mytilisepta virgata transcriptome
Domain name | PFAM code | domain count |
|---|---|---|
Protein kinase domain | PF00069 | 200 |
Immunoglobulin domain | PF00047 | 190 |
Protein tyrosine kinase | PF07714 | 183 |
Ankyrin repeats (3 copies) | PF12796 | 182 |
Ankyrin repeats (many copies) | PF13857 | 175 |
EF-hand domain pair | PF13833 | 161 |
C1q domain | PF00386 | 161 |
Immunoglobulin I-set domain | PF07679 | 161 |
Ankyrin repeat | PF00023 | 160 |
EF hand | PF00036 | 157 |
Lectin C-type domain | PF00059 | 154 |
EGF-like domain | PF00008 | 149 |
EF-hand domain | PF13405 | 147 |
AAA domain | PF00004 | 139 |
Zinc finger, C3HC4 type (RING finger) | PF00097 | 129 |
50S ribosome-binding GTPase | PF01926 | 118 |
Leucine rich repeat | PF13855 | 117 |
7 transmembrane receptor (rhodopsin family) | PF00001 | 117 |
WD domain, G-beta repeat | PF00400 | 110 |
Immunoglobulin V-set domain | PF07686 | 109 |
B-box zinc finger | PF00643 | 108 |
von Willebrand factor type A domain | PF00092 | 106 |
Leucine Rich repeats (2 copies) | PF12799 | 103 |
Tetratricopeptide repeat | PF00515 | 103 |
Zinc finger, C2H2 type | PF00096 | 102 |
F5/8 type C domain | PF00754 | 42 |
Fibrinogen C-terminal globular domain | PF00147 | 37 |
Galactose binding lectin domain | PF02140 | 23 |
Ricin-type beta-trefoil lectin domain-like | PF14200 | 6 |
H-type lectin domain | PF09458 | 6 |
Galactoside-binding lectin | PF00337 | 2 |