Skip to main content

Table 1 The numbers of up- and down-regulated transcription factor (TF) genes and the ratio between up- and down-regulated TF genes following 2 h, 4 h, 6 h, 12 h or 24 h of deacclimation (DEA) at warm temperatures or in non-acclimated (NA) plants

From: Rapid transcriptional and metabolic regulation of the deacclimation process in cold acclimated Arabidopsis thaliana

Treatment Number of genes   Overlap with genes regulated in the opposite direction after 3 d of CA (%)
  Up-regulated Down-regulated Regulated Ratio Up-regulated Down-regulated
2 h DEA 26 33 59 0.79 43 11
4 h DEA 3 12 15 0.25 6 4
6 h DEA 0 5 5 NA NA 1
12 h DEA 5 16 21 0.31 13 5
24 h DEA 22 284 306 0.08 81 88
NA 16 198 214 0.08
  1. Numbers indicate the genes out of the 476 shown in Fig. 2 that were significantly (FDR P < 0.05) regulated relative to cold acclimated (CA) plants