Skip to main content

Table 1 The numbers of up- and down-regulated transcription factor (TF) genes and the ratio between up- and down-regulated TF genes following 2 h, 4 h, 6 h, 12 h or 24 h of deacclimation (DEA) at warm temperatures or in non-acclimated (NA) plants

From: Rapid transcriptional and metabolic regulation of the deacclimation process in cold acclimated Arabidopsis thaliana

Treatment

Number of genes

 

Overlap with genes regulated in the opposite direction after 3 d of CA (%)

 

Up-regulated

Down-regulated

Regulated

Ratio

Up-regulated

Down-regulated

2 h DEA

26

33

59

0.79

43

11

4 h DEA

3

12

15

0.25

6

4

6 h DEA

0

5

5

NA

NA

1

12 h DEA

5

16

21

0.31

13

5

24 h DEA

22

284

306

0.08

81

88

NA

16

198

214

0.08

  1. Numbers indicate the genes out of the 476 shown in Fig. 2 that were significantly (FDR P < 0.05) regulated relative to cold acclimated (CA) plants