Table 5 X. innexi two partner secretion pathway loci
XIS1_ | Gene | Length (aa) | Predicted Function | TPS cluster or relevant features |
|---|---|---|---|---|
1110028 | xhlB xi | 558 | Beta-barrel | Cluster II (hemolysin) |
1110029 | xhlA xi | 1468 | Exoprotein | Cluster II (hemolysin), TPS motif |
1600025 | xhlB2 xi | 558 | Beta-barrel | Cluster II (hemolysin) |
1600026 | xhlA2 xi (part 1) | 656 | Exoprotein fragment | Cluster II (hemolysin), TPS motif |
1600027 | xhlA2 xi (part 2) | 801 | Exoprotein fragment | Cluster II (hemolysin) |
680062 | cdiB xi | 569 | Beta-barrel | Cluster I (Cdi) |
680061 | cdiA xi | 4029 | Exoprotein | Cluster I (Cdi), TPS motif and VENN domain |
680060 | cdiI xi | 4029 | Immunity protein | Cluster I (Cdi), putative cdiI xi |
260016 | cdiB-like xi | 571 | Beta-barrel | Cluster I (Cdi) |
260017 | cdiA-like (part 1) | 1157 | Exoprotein fragment | Cluster I (Cdi), TPS motif, lacks VENN motif |
270001 | cdiA-like (part 2) | 180 | Exoprotein fragment | Cluster I (Cdi), lacks TPS motif and VENN domain, contains beta barrel region, |
280001 | cdiA-like (part 3) | 4062 | Exoprotein fragment | Cluster I (Cdi), lacks TPS motif, starts with the beta barrel region, includes VENN domain |
1500009 | tpsB xi | 566 | Beta-barrel | Cluster III (DUF637 domain) |
1500008 | tpsA xi | 1907 | Exoprotein | Cluster III (DUF637 domain), TPS motif and DUF637 domain |
1500007 | tpsI xi | 110 | unknown | potential immunity protein |