Table 2 Over-representation of DEGs (allo- vs autotriploids) in recombined regions of allotriploids
From: Effect of paleopolyploidy and allopolyploidy on gene expression in banana
| Â | Genome | B3:A0 regions | B1:A2 regions | ||||
Genotype | DEGs | Genes | DEGs | P value | Genes | DEGs | P value |
Cachaco | 987 (0.03) | 3105 (0.09) | 168 (0.17) | 3.0e-17 | 861 (0.03) | 12 (0.01) | < 0.01 |
Dole* | 577 (0.02) | 3105 (0.10) | 111 (0.14) | < 0.01 | 861 (0.03) | 8 (0.01) | < 0.01 |
Fougamou | 823 (0.02) | 3483 (0.10) | 188 (0.23) | 7.1e-32 | 1226 (0.04) | 11 (0.01) | < 0.01 |
Kluai Tiparot | 1661 (0.05) | 22,105 (0.66) | 1249 (0.75) | 5.29e-16 | N/A | N/A | N/A |
Monthan | 558 (0.02) | 3105 (0.09) | 102 (0.17) | 1.11e-11 | 861 (0.03) | 4 (0.01) | < 0.01 |
Simili Radjaha | 547 (0.02) | 1847 (0.06) | 97 (0.16) | 1.05e-25 | 393 (0.01) | 1 (0.00) | < 0.05 |
| Â | Genome | B2:A1 regions | B0:A3 regions | ||||
Genotype | DEG | Genes | DEGs | P value | Genes | DEGs | P value |
Pisang Ceylan | 131 (0.004) | 3116 (0.09) | 28 (0.21) | 2.8e-06 | 803 (0.02) | 2 (0.002) | Not significant |