Table 3 DESeq2 statistics for mitochondrial ribosomal RNA and differentially expressed mRNA transcripts
From: Transcriptome analysis of egg viability in rainbow trout, Oncorhynchus mykiss
Gene | Base mean | Log2 fold change | P-value | FDR |
|---|---|---|---|---|
dlp | 119,812 | −1.73 | 3.86E-05 | 1.94E-03 |
mt-atp6 | 1,338,170 | −1.63 | 6.52E-05 | 2.89E-03 |
mt-atp8 | 113,992 | −1.77 | 5.49E-05 | 2.58E-03 |
mt-col | 8,076,707 | −1.94 | 2.65E-05 | 1.46E-03 |
mt-coll | 7,324,055 | −1.88 | 2.09E-05 | 1.23E-03 |
mt-colll | 4,570,645 | −1.81 | 2.31E-05 | 1.31E-03 |
mt-cyb | 8,530,201 | −2.10 | 4.01E-06 | 3.51E-04 |
mt-nd1 | 914,918 | −1.70 | 5.69E-05 | 2.63E-03 |
mt-nd2 | 418,048 | −1.70 | 9.08E-05 | 3.76E-03 |
mt-nd3 | 265,015 | −1.35 | 9.77E-04 | 2.05E-02 |
mt-nd4 | 994,427 | −1.67 | 9.67E-05 | 3.96E-03 |
mt-nd4l | 86,839 | −1.73 | 8.50E-05 | 3.55E-03 |
mt-nd5 | 702,120 | −1.55 | 3.57E-04 | 1.01E-02 |
mt-nd6 | 238,040 | −1.64 | 1.14E-04 | 4.43E-03 |
my-tn | 136 | −1.80 | 5.90E-04 | 1.43E-02 |
mt-rnr1 | 327,067 | −1.06 | 4.83E-02 | 2.43E-01 |
mt-rnr2 | 1,289,619 | −1.30 | 1.47E-02 | 1.20E-01 |