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Fig. 2 | BMC Genomics

Fig. 2

From: What determines host specificity in hyperspecialized plant parasitic nematodes?

Fig. 2

Differentially expressed effector genes between four Globodera species. Differential analysis was performed by group comparison according to their pathogenicity on potato; G. rostochiensis and G. pallida vs. G. mexicana and G. tabacum. Expression values are score given by pheatmap function (pheatmap 1.0.10 package in R) calculated using normalized read counts, as calculated by DESeq2. SeqID and Gene description corresponds to sequences ID and annotation of G. rostochiensis reference transcriptome (nGr.v1.1). The presence of a signal peptide was confirmed in the transcripts marked with an (*) but was not possible to evaluate in the others due to a truncated 5′ sequence

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