Table 1 The results of separate transcriptome assemblies of P. sikkimensis in all three transplant conditions (ambient, below ambient and above ambient), and the reference assembly generated by combining the reads from all three conditions were documented in tabular form
Transcriptome data analysis | Above ambient | Ambient | Below ambient | Combined assembly |
|---|---|---|---|---|
Total Number of genes | 44,957 | 48,674 | 38,423 | 67,201 |
N50 (bp) | 1371 | 1386 | 1405 | 1359 |
Total transcripts | 53,133 | 58,644 | 44,142 | 81,056 |
GC percent | 39.89 | 39.61 | 40.49 | 38.99 |
Average contig length (bp) | 475 | 822 | 854 | 785.87 |