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Table 1 qRT-PCR and RNA-Seq expression data of selected contigs over-expressed during R. necatrix growth on avocado roots

From: Transcriptome analysis of the fungal pathogen Rosellinia necatrix during infection of a susceptible avocado rootstock identifies potential mechanisms of pathogenesis

Gene IDDescriptionRGA vs RGPDA
qRT-PCR FCaRNA-Seq FC
SAMD00023353_12800020Related to pisatin demethylase838.6890.24
SAMD00023353_2901300FAD-binding domain-containing protein529.5877.04
SAMD00023353_2901290Related to protoporphyrinogen oxidase160.78104.04
SAMD00023353_10000100Cytochrome p450129.6446.61
SAMD00023353_0800710Fungal cellulose binding domain50.5935.61
  1. aData are displayed as fold change (FC), calculated by comparing R. necatrix growth on avocado roots (RGA) with R. necatrix growth on Potato Dextrose Agar medium (RGPDA). The expression data are the mean of three biological replicates. Bold numbers indicate statistically significant results (t-Test, P < 0.05)