Table 2 Genes encoded in the C. macrophyllum chloroplast genome
Group of Genes | Gene Name |
|---|---|
tRNA genes | trnH-GUG trnK-UUU* trnQ-UUG trnS-GCU trnG-GCC* trnR-UCU trnC-GCA trnD-GUC trnY-GUA trnE-UUC trnT-GGU trnS-UGA trnG-GCC trnfM-CAU trnS-GGA trnT-UGU trnL-UAA* trnF-GAA trnV-UAC* trnM-CAU trnW-CCA trnP-UGG trnI-CAU(× 2) trnL-CAA(× 2) trnV-GAC(× 2) trnI-GAU*(× 2) trnA-UGC*(× 2) trnR-ACG(× 2) trnN-GUU(× 2) trnL-UAG |
rRNA genes | rrn16(× 2) rrn23(× 2) rrn4.5(× 2) rrn5(× 2) |
Ribosomal small subunit | rps16* rps2 rps14 rps4 rps18 rps12**(× 2) rps11 rps8 rps3 rps19 rps7(× 2) rps15 |
Ribosomal large subunit | rpl33 rpl20 rpl36 rpl14 rpl16* rpl22 rpl2(× 2) rpl23(× 2) |
DNA-dependent RNA polymerase | rpoC2 rpoC1* rpoB rpoA |
Photosystem I | psaB psaA psaI psaJ psaC |
Large subunit of rubisco | rbcL |
Photosystem II | psbA psbK psbI psbM psbC psbZ psbG psbJ psbL psbF psbE psbB psbT psbN psbH |
NADH dehydrogenase | ndhJ ndhK ndhC ndhB*(×2) ndhF ndhD ndhE ndhG ndhI ndhA* ndhH |
Cytochrome b/f complex | petN petA petL petG petB* petD* |
ATP synthase | atpA atpF* atpH atpI atpE atpB |
Maturase | matK |
Subunit of acetyl-CoA carboxylase | accD |
Envelope membrane protein | cemA |
Protease | clpP** |
Translational initiation factor | infA |
C-type cytochrome synthesis | ccsA |
Conserved open reading frames (ycf) | ycf3** ycf4 ycf2(×2) ycf1(× 2) |