Skip to main content

Table 2 De novo transcriptome assembly assessment results

From: Transcriptome analysis reveals molecular mechanisms responsive to acute cold stress in the tropical stenothermal fish tiger barb (Puntius tetrazona)

Total unigenes BUSCO Complete BUSCOs Fragmented BUSCOs Missing BUSCOs Total BUSCO groups searched
91.9%a 7.2% 0.9% 2586
CEGMA Complete Complete+partial
Protsb Completenessc Protsb Completenessc
227 91.53 241 97.18
Coding genes BUSCO Complete BUSCOs Fragmented BUSCOs Missing BUSCOs Total BUSCO groups searched
71.9%d 7.7% 20.4% 2586
  1. a: Complete single-copy BUSCOs occupied 27.4%; Complete duplicated BUSCOs occupied 464.5%
  2. b: The number of assembled core genes
  3. c: The percent of assembled core genes in core gene set
  4. d: Complete single-copy BUSCOs occupied 23.0%; Complete duplicated BUSCOs occupied 48.9%