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Table 4 Details of the sRNAs predicted by in silico analysis with sRNAscanner

From: Genome-wide identification of Azospirillum brasilense Sp245 small RNAs responsive to nitrogen starvation and likely involvement in plant-microbe interactions

sRNA

Genomic Location

Position

Sequence (5′-3′)

Length (bp)

AbSp_464a

Plasmid,

AZOBR_p4

NC_016596.1:167096–167,348

TGTGTTTTAAATGGATGTGCGAATTCTATTGTTTGTTATCAGCGGTTTG

49

AbSp_465a

Plasmid,

AZOBR_p6

NC_016597.1:36503–85,307

TGACAATGCAAAGACCGTCTCCTTTTCCGCAATCAAACAAGAAGAAAATGCCCTCGCTCTATTCCTACACTCGGTGAGCGCTGTTCCCGTCGAGCTGGCAGCC

103

  1. aThese sRNA were also identified through RNA-seq analysis
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BMC Genomics

ISSN: 1471-2164

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