BMC Genomics

Table 1 QTL summary for scald resistance

From: Identification of QTLs conferring resistance to scald (Rhynchosporium commune) in the barley nested association mapping population HEB-25

							# families with GWAS effect^f)
QTL	Chr	cM^a)	bp^b)	Peak marker^c)	DR^d)	R^{2 e)}	< 0	< −0.5	CG^g)
QRs.1H	1H	43.15	38,549,052	BOPA2_12_11266	31	0.08	24	1
QRs.2H	2H	9.20	15,507,257	JHI_Hv50k_2016_67600	76	0.11	4	2	Rrs17 [36]
QRs.3H	3H	50.65	481,480,921	JHI_Hv50k_2016_182720	59	0.35	22	18	Rrs1 [22]
QRs.4H	4H	113.40	646,906,186	JHI_Hv50k_2016_276923	60	0.05	25	4
QRs.5H	5H	96.98	563,938,261	JHI_Hv50k_2016_321241	58	0.10	24	6
QRs.6H	6H	28.40	18,911,246	JHI_Hv50k_2016_378176	69	0.09	25	3	Rrs13 [12]
QRs.7H-1	7H	32.15	38,487,377	JHI_Hv50k_2016_459621	44	0.06	6	0
QRs.7H-2	7H	111.3	624,196,645	JHI_Hv50k_2016_503391	61	0.12	16	3

^aGenetic position in centiMorgan derived from flanking markers based on the barley Infinium iSelect 9 k chip [56]
^bPhysical position based on Bayer et al. [57]
^cPeak marker of QTL
^dDetection rate in 100 cross-validation runs
^eExplained genotypic variance of QTL in the whole NAM population.
^fNumber of families with GWAS effect < 0 (i.e. resistance improving) and < −0.5 (stronger resistance improvement) as compared to Barke
^gCandidate gene

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