Table 2 Gene numbers and percentages of young duplicate genes from three duplication types in species-specific and lineage-specific expansions
From: Adaptive evolution driving the young duplications in six Rosaceae species
Species | Â | Species-specific expansions | Lineage-specific expansions | Â | |||||
|---|---|---|---|---|---|---|---|---|---|
| Â | Tandem Duplication | Transposed Duplication | Whole Genome Duplication | Total number | Tandem Duplication | Transposed Duplication | Whole Genome Duplication | Total number | |
F. vesca | Number | 217 | 158 | 83 | 2932 | 148 | 118 | 91 | 1092 |
Percentage | 7.40% | 5.39% | 2.83% | 13.55% | 10.81% | 8.33% | |||
M. x domestica | Number | 3247 | 3044 | 2874 | 15,141 | 2765 | 3680 | 7287 | 18,221 |
Percentage | 21.45% | 20.10% | 18.98% | 15.17% | 20.20% | 39.99% | |||
P. communis | Number | 863 | 1332 | 1937 | 6885 | 1693 | 2631 | 6292 | 14,028 |
Percentage | 12.53% | 19.35% | 28.13% | 12.07% | 18.76% | 44.85% | |||
P. persica | Number | 1244 | 158 | 154 | 3314 | 130 | 444 | 522 | 2428 |
Percentage | 37.54% | 4.77% | 4.65% | 5.35% | 18.29% | 21.50% | |||
R. chinensis | Number | 1017 | 409 | 532 | 6804 | 233 | 170 | 187 | 1806 |
Percentage | 14.95% | 6.01% | 7.82% | 12.90% | 9.41% | 10.35% | |||
R. occidentalis | Number | 173 | 90 | 36 | 1734 | 55 | 93 | 64 | 968 |
Percentage | 9.98% | 5.19% | 2.08% | 5.68% | 9.61% | 6.61% | |||