Fig. 4

Many non-coding transcripts are differentially expressed during infection with Toxoplasma. Wild type BMDM were infected with either the highly virulent RH strain or the less-virulent PTG strain, and 6 h later RNA was isolated for sequencing. Differentially expressed mouse non-coding transcripts were identified based on statistical significance (PPDE greater than 0.95) and a fold change of greater or less than 2. a Classification of differentially expressed mouse non-coding transcripts by type. b Total number of non-coding transcripts of higher or lower abundance during infection. c Venn diagrams of differentially expressed non-coding transcripts revealing shared and unique expression patterns between infection strains. d List of all noncoding transcripts differentially expressed between RH and PTG. e List of all noncoding differentially expressed transcripts shared between RH and PTG infection. Experiments were performed in at least triplicate with BMDM from separate mice