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Table 3 Candidate genes within the genomic region spanning the single bin

From: Genetic analysis of three maize husk traits by QTL mapping in a maize-teosinte population

QTL

Chr

Bin

Bin length (bp)

ID

Positiona

Annotationb

qHL-1-1

1

PZE-101160628

548,905

GRMZM2G106928

203,625,515..203631858

Copper/zinc superoxide dismutase 2

qHN-1-1

1

PZE-101021308

2,719,182

GRMZM2G162749

14,848,652..14854535

Cycling DOF factor 1

GRMZM2G034302

15,067,584..15075973

Sucrose transporter 2

qHN-1-2

1

SYN9147

2,128,406

GRMZM2G032339

277,216,651..277300425

K-box region and MADS-box transcription factor family protein

GRMZM5G826714

277,445,149..277451612

COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family

qHW-3-1

3

PZE-103154161

1,040,297

GRMZM2G037650

207,219,415..207228119

Myb domain protein 42

  1. aGene position according to the B73 reference sequence (V2); bGene annotated according to their homologous gene in Arabidopsis thaliana or rice