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Table 2 Modules of co-expressed genes correlate with each other and with H. defensa titre

From: Triple RNA-Seq characterizes aphid gene expression in response to infection with unequally virulent strains of the endosymbiont Hamiltonella defensa

  1. Genes were clustered according to their expression patterns across all libraries containing H. defensa (except the heavily contaminated library H15R1) using two approaches, a correlation approach as described in Smith et al. [51] and weighted correlation network analysis (WGNA). The genes used for analysis were clustered into modules of co-expressed genes. These modules were tested for GO-term enrichment, for correlation with modules of another organism and for correlation with H. defensa titre