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Table 1 Differentially expressed genes enriched in PPAR signaling pathway, Calcium signaling pathway and ECM-receptor interaction (p < 0.05)

From: Integrative analysis of histomorphology, transcriptome and whole genome resequencing identified DIO2 gene as a crucial gene for the protuberant knob located on forehead in geese

Pathways

DEGs

WPvsLP_log2FoldChange

SPvsLP_log2FoldChange

PPAR signaling pathway

FABP7

1.47

2.07

LPL

2.34

2.58

FABP3

3.31

4.39

UBB

1.51

1.56

ACSBG1

1.32

1.98

Pathways

DEGs

WGvsLG_log2FoldChange

SGvsLG_log2FoldChange

Calcium signaling pathway

CD38

-2.00

-2.01

CACNA1H

-1.79

-1.92

NOS2

2.96

1.43

ATP2B2

2.76

2.92

CAMK1G

-2.22

-1.62

CACNA1I

3.39

3.18

NOS1

-3.30

-3.84

RYR2

-2.06

-1.56

HTR4

-2.83

-2.30

AVPR1A

-2.01

-1.14

PTAFR

1.66

1.30

HTR2C

-2.55

-2.23

HRH1

-1.78

-1.24

P2RX1

-2.56

-1.63

GRIN1

-6.62

-4.08

ADCY3

-2.30

-3.24

GRM1

6.21

5.55

Pathways

DEGs

WPvsLP_log2FoldChange

SPvsLP_log2FoldChange

ECM-receptor interaction

HMMR

-2.26

-2.19

VTN

4.30

3.24

Pathways

DEGs

WGvsLG_log2FoldChange

SGvsLG_log2FoldChange

ECM-receptor interaction

HMMR

-3.00

-2.77

VTN

2.44

2.03

  1. Note: DEGs differently expressed genes, WP skin located on knob in Sichuan White goose, SP skin located on knob in Lion head goose, LP skin located on knob in Landes goose, WG bone located in knob in Sichuan White goose, SG bone located in knob in Lion head goose, LG bone located in knob in Landes goose