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Table 4 Evry.Ler-1 ONT SVs (> 1 kb) overlapping Col-0 TAIR10.1 reference genes and TEs annotation features

From: Oxford Nanopore and Bionano Genomics technologies evaluation for plant structural variation detection

Features noTE TE TOTAL (%)
noGENE GENE noGENE GENE
Common SV UU 79 59 93 179 410 (34.6)
MU 59 38 150 291 538 (45.5)
Specific SV UN 28 28 71 109 236 (19.9)
SV number (%) 166 (14.0) 125 (10.6) 314 (26.5) 579 (48.9) 1184
TOTAL (%) 291 (24.6) 893 (75.4) 1184